Gene Cmaq_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1316 
Symbol 
ID5708668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1391342 
End bp1391629 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content39% 
IMG OID641275822 
Productaminotransferase, class I and II 
Protein accessionYP_001541132 
Protein GI159041880 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.34309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTATCG TACTAAGTAC GATTAAGGTT AGGGAGTATT TGTATGGGAG GTTTAGTGAA 
TTGGGCTTAA GACCATTAGG TTCAGTGACC AACTTCATAA CATTCCACGT GTTTAAGCCG
AATGAAGTGT ATGAGGGGTT GTTTAAGAGG GGCTTCATAC TAAGGAACCT AAGCGGTAAA
GTAATGTGTG AGGACTGCTT GAGAGCAACA ATACCACCAA TGCATATTGC TGAGGAATTA
ATTAATAACT TGGAGGCATT AATGAAGTCT CACCTAATGG ATACTTAA
 
Protein sequence
MIIVLSTIKV REYLYGRFSE LGLRPLGSVT NFITFHVFKP NEVYEGLFKR GFILRNLSGK 
VMCEDCLRAT IPPMHIAEEL INNLEALMKS HLMDT