| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1315 |
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| Symbol | |
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| ID | 5708667 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1388878 |
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| End bp | 1391244 |
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| Gene Length | 2367 bp |
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| Protein Length | 788 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275821 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001541131 |
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| Protein GI | 159041879 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.440295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGGT CAATAATTCC TTACGTACTA GTCTCAATAG CAGTAGCCGC CTTAATCACA
GTAATCCTTG GGGGTCACAT AGCCTATGCG GCTTCAAATA CAGTGACAAT AATTGAGGCT
ATTCCAGGTA CAACCATTTA CACTCCTGGT CAACCTATCT GGAATCCATA CGCACCCAAC
AACTTCATAG GTACTGTGGG AACATACATG CCACTTGCAT TATACAATCC AATTACAGCT
AAATTCTATC CTGTTTTGGC TGAGAATTGG ACTGCTCAAG TTCTTCCTAA TGGATCAGGT
ATATTCACAA TCTACCTTAG GCCTGGCTTA TACTGGTTTA ATGGTTCAGC CACAATACCC
TTCACCGCAT GGGATGTTTA TGCGGAGTTC TATATTGGTG TTAAGGCATT CAGCTGGTAT
TATCCATTCA TGCAACCACA ATACGCCGAT GAAGACATTA GAGTATTGAA TAATTACACG
ATACAATTCC TATTCCAAAC CTGGAGCCCG CAGCAAATAT ACTATATATT AACAACTACG
ATTGATACAC CATACGCAGT ATGGAAGCCT ATTGTTGAGA AGCTTCAAAC AATGAATGTT
ACTCAAGCAT CAGCATACGG TAATAATGTT ACTAAGTTTG CTGCACCATA CTGGGGCTTA
AGTCCATATT ATGTTGAATT ATCAACATTG AGCGCAACCT ACCAGACACT GTTACTTGAA
CCAATGTACT TTAATGGTGT TCCATTACTA GCATCATGGG TTAAAATATT CCCATTCAAT
GATTGGAGCA TCTACCCGAA GTACGTTAGA TGGTGGGTTG GTGGTAATAC TCAAGCAATG
ACTGCCTTCC TGGCTCGTAA GGCTAATTTA GGGTTCATTG GATTATCACT ACAGCAGGAG
GCTACGCTCA ATGCCAGTGG CTTTGGTGAA TATAATGGGC CGAATTATGC GACGAACGGT
TTCACGCTTA ATCCAAACAT TTACCCATTC AATATTCCTC AGGTTAGGCA AGCATTCTGC
TACATTATTA ATAGAACGGC TGAATCATTG GCCTGGGGTG GATTATATGC ACCTGACCCA
TACCCAGTCC CTGTAGCCAA CTTCCAGCCA TCAATACAAT CATACCCATC AAGCGTGTGG
AGTATTGTAA CTGTGCATTG TACAACAAAT TGGACTAAGG CTGCTCAATT ACTGGAATCA
GCCGGTTTAA CCTATAAGAA TGGTCAATGG TATCTGCCTA ATGGGACCCC ATTTAAGTTA
ACTTTAATAG TGCCATCAGG TTTCACTGAC TGGGCTACAT TCTCATCAGC TGCCGCTGTC
TCAATAAGCC AGTTCGGTAT ACCTACAACA TTATTAGCCT TGGATACTTC AACATACTGG
AGTACAATAT TCCCTAATGG TGAGTATGAA ATGGCTATAA CATGGATGAC GTGGTCAAGG
GGTTACGGTG ACTTCGGTTT CCTAGCATCG CCATGGTGGA CTTTCCCAGC ATTCAATCTC
TCCAAGGCTT GGCCATTCCA GTGGCCTAAT GGAACATGCA CACCAGTAAC AGCACCTAGC
ATACCAGGCT TTACTCCACC TAATAGTACG ATAGTATGGT GTGTTAATTC AACATTCGGC
TACATTAACT TAACCAACTG GGGCGTAGCA TTTGCGGCCA CTGCACCAGG GATGTCTCAG
TATGATGAGC TTCTGAAGGT ATTATTCGCA TGGTATGAAT ACTACATGCC AGTGATACCA
AGCTTAACCC AGAACCAGCA ATTCAACTAT AATCCAGCTG ACTTTGATAT TGAATGGTGG
GTTAAAGGCT TAACATTATT CTCATGGATA CCCTTTGTAC AGGGACCATG GGGTGAAACA
CTACCCATAA TGCTTTGGAA TGCTGGATTC GGTGCAATAG CACCACCAGG TGTAGTACCA
CCGTTAGCGC AGGCTGCCGT CAATGGCTCA CTATGGAGAA TTGACCCGCA GTTAGCTGCA
TTCTTAGGAT GGAGCCCAAG CACAGTGAAC CTAGAAGCCA TAGCCTCATA CTTCCATATA
CCGTATACTC CAGTATCAAC CACTACTTCA ACCACGACTA CTACTACTTC AACCACCACA
ACTACTACTA CGCCGGTGAC TACTACTTCA ACGACTACTG CCACAACCAC TACTACTGCT
ACAACAACCA CTACGGCTGT TAGCACTGTT ACAAGCACAG TAACAACCAC TGCCGTAAGC
ACTGTAACAT CAACAGCAAC CACTACGGCA GTATCAACCG TAACCGTGAC TAAACCAGTA
ATATCAACAG CACTAATAGC AGGAATAGTA ATCATAGTAA TCGTAATAGC AGCAATAGCA
GCAATAATAG CATTAAGAAG AAGATGA
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| Protein sequence | MSRSIIPYVL VSIAVAALIT VILGGHIAYA ASNTVTIIEA IPGTTIYTPG QPIWNPYAPN
NFIGTVGTYM PLALYNPITA KFYPVLAENW TAQVLPNGSG IFTIYLRPGL YWFNGSATIP
FTAWDVYAEF YIGVKAFSWY YPFMQPQYAD EDIRVLNNYT IQFLFQTWSP QQIYYILTTT
IDTPYAVWKP IVEKLQTMNV TQASAYGNNV TKFAAPYWGL SPYYVELSTL SATYQTLLLE
PMYFNGVPLL ASWVKIFPFN DWSIYPKYVR WWVGGNTQAM TAFLARKANL GFIGLSLQQE
ATLNASGFGE YNGPNYATNG FTLNPNIYPF NIPQVRQAFC YIINRTAESL AWGGLYAPDP
YPVPVANFQP SIQSYPSSVW SIVTVHCTTN WTKAAQLLES AGLTYKNGQW YLPNGTPFKL
TLIVPSGFTD WATFSSAAAV SISQFGIPTT LLALDTSTYW STIFPNGEYE MAITWMTWSR
GYGDFGFLAS PWWTFPAFNL SKAWPFQWPN GTCTPVTAPS IPGFTPPNST IVWCVNSTFG
YINLTNWGVA FAATAPGMSQ YDELLKVLFA WYEYYMPVIP SLTQNQQFNY NPADFDIEWW
VKGLTLFSWI PFVQGPWGET LPIMLWNAGF GAIAPPGVVP PLAQAAVNGS LWRIDPQLAA
FLGWSPSTVN LEAIASYFHI PYTPVSTTTS TTTTTTSTTT TTTTPVTTTS TTTATTTTTA
TTTTTAVSTV TSTVTTTAVS TVTSTATTTA VSTVTVTKPV ISTALIAGIV IIVIVIAAIA
AIIALRRR
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