Gene Cmaq_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1309 
Symbol 
ID5708487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1382289 
End bp1383431 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content46% 
IMG OID641275816 
ProductN(2),N(2)-dimethylguanosine tRNA methyltransferase 
Protein accessionYP_001541126 
Protein GI159041874 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1867] N2,N2-dimethylguanosine tRNA methyltransferase 
TIGRFAM ID[TIGR00308] tRNA(guanine-26,N2-N2) methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.420776 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGTGA TTCAGAGGGA GGGTGCAGTC TCCTTCTATG CACCGGACTT AAGCAAGTAC 
ATTGCTGGTG GTCGTATTGA GCCTGCTTGG GCGCCAGTAT TCTATAATCC AGCCATGGCT
AATAATAGGA GTATATCAGT TATTATTGTT AGGGCTTACT TGAGGCTTCT TGGTAGGAAC
GGTGTATTAT GTGAACCATT CACCGGTACC GGTGTGAGGA GTATTAGGTA TGTTAAGGAG
GCTGGGGTTG AGAAGGTTAT TGCCGGTGAT ATTGATGATG CTGCGGTTAA CTTAGCCTCA
AGGAACGTTG AGTTAAATGG GTTAAGGGAT CAGATTAAGG TAACTAGGAG TGATGCCAAT
GCCCTACTCG CTAATAATAA GTGCGATATA ATTGATGTGG ATCCCTACGG TTCACCAGCC
CCATTCATTA ACTCCGCCTT ACTCTCAATT AAGCATGGTG GATTACTATG CGCCACGGCC
ACTGACTTAG CGGTACTGCA GGGTAGTTAC GTTAATAAGG CGATTAGGAG GTATGGCTTT
AGGCCACTTA GGGGCTTCTT ATCTAGGGAA ATAGGCTTAA GGGGTTTACT GGGGTTCATT
GCTAGGCAAG CCCTGGTTAT TGATGCTGGG GTTAAACCAT TATTGGCGTA TTGGGAGAGG
CATTACTATA GAGTGTGCTT AATAGTGAGT AAGGATAGGG GGACTGCCAG GGAGACTGCG
GGGAATCTGG GTTACGCCTA CTACTGCAGT GAATCCTTGA GGAGGGGCTT CATTAAGGGG
TATCCAATTG GCGTTAAGGG TGAGTGCGCG GTTAGTGGAC CCCTGTGGAT TGGGGCTATT
GGGGATGTTG AATTCCTGGA CTACTCATTA TCATTAATTA ATAATACTGA TTACGAATTG
AAGGCTGCTG AAATAATTAA GGGGACACTG CCTGATAACC TACCAATACC CTTATACTAC
ACTGTAACGG AGCTGGGTAG GGGTTTAGGC TTCGTACCGA GTCCATTGAG GCTTAGGGCA
TATTTAATGG AGAATGGTAT TGAGGCCTAC GGTACGCATT TCACTACTGA TGGGGTTAAG
ACTAATGCTG AGCCATGGAG GTTAATTAGG ATTATTCACT CAATCCCTCT TACCAACAAC
TAA
 
Protein sequence
MYVIQREGAV SFYAPDLSKY IAGGRIEPAW APVFYNPAMA NNRSISVIIV RAYLRLLGRN 
GVLCEPFTGT GVRSIRYVKE AGVEKVIAGD IDDAAVNLAS RNVELNGLRD QIKVTRSDAN
ALLANNKCDI IDVDPYGSPA PFINSALLSI KHGGLLCATA TDLAVLQGSY VNKAIRRYGF
RPLRGFLSRE IGLRGLLGFI ARQALVIDAG VKPLLAYWER HYYRVCLIVS KDRGTARETA
GNLGYAYYCS ESLRRGFIKG YPIGVKGECA VSGPLWIGAI GDVEFLDYSL SLINNTDYEL
KAAEIIKGTL PDNLPIPLYY TVTELGRGLG FVPSPLRLRA YLMENGIEAY GTHFTTDGVK
TNAEPWRLIR IIHSIPLTNN