Gene Cmaq_1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1297 
Symbol 
ID5708962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1371058 
End bp1371858 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content45% 
IMG OID641275804 
Productalpha-L-glutamate ligase 
Protein accessionYP_001541114 
Protein GI159041862 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR00768] alpha-L-glutamate ligases, RimK family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.276689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGTTAA CCATAACCTA CGATTACTTA AGAGAGGAGG AGGTGGAGTT AATTAAGGCA 
TTTAATGAAC TCGGCGTTAA CGTTAATACG CTGCAATCCA CGAAACCACT CCACGTTAAG
GAGCTTAATG GAGTCTTCCT AGTGAGGAAC CTTAACCATA GGACTGCAAT AACCATGGCC
GGTATAATTG AGAACACTGG TGGTGTATCA ATAAACAGGT ACCTGACCCT CTCATTAACG
TGGAATAAGG CCATTACGAC TGCACTACTT AAGAGAATAG GCCTACCCGT CCCAGACACC
TACGTTGTAT TTGAGCCTAT TATTGATGGT GTAGCCGGTG GTGGGCGTAT TATTAAGCCT
GCCTCAGGTT CATGGGGTAG GTTAACGGCC ATTGTAAGTG ATGGTGAAGC TAAGCTACTG
ATAAAGCATG CTAAGGATCA CTTACCCGTG CTTCTTCAAG AGAGGATTGG TGACGGTAGT
GACTTAAGGA TCTTCGTAAT TAATGGTTCA GTGGTTGCAT CAATGATGAG GAAGCCCCCT
CAGGGTGATT GGAGGAGTAA TGTAGCTAGG GGTGGGTTGG CTATGCCCAT TAAGGTTAAT
GAGGAATTAG AGGAGTATGC AATTAAGGCC ACTGAGGCTG TGGGTGCATT CTATGCTGGT
GTTGATGTTT TAATAGGTAG GGATGGCTAC TATATAAGTG AGATTAACGG CATCCCTGAA
TTTAAGGCAA TAAGCAAGGT CAGTGGTGTT AGGGTTAGTT TTAAGCTGGC TGAGGCTGTC
AGTGAGTGGA TTAAGAGATG A
 
Protein sequence
MELTITYDYL REEEVELIKA FNELGVNVNT LQSTKPLHVK ELNGVFLVRN LNHRTAITMA 
GIIENTGGVS INRYLTLSLT WNKAITTALL KRIGLPVPDT YVVFEPIIDG VAGGGRIIKP
ASGSWGRLTA IVSDGEAKLL IKHAKDHLPV LLQERIGDGS DLRIFVINGS VVASMMRKPP
QGDWRSNVAR GGLAMPIKVN EELEEYAIKA TEAVGAFYAG VDVLIGRDGY YISEINGIPE
FKAISKVSGV RVSFKLAEAV SEWIKR