Gene Cmaq_1293 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1293 
Symbol 
ID5708903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1364869 
End bp1365432 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content47% 
IMG OID641275800 
Producthypothetical protein 
Protein accessionYP_001541110 
Protein GI159041858 
COG category[R] General function prediction only 
COG ID[COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0201116 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAGGT TTAAGTTCCC TAATGGTGTG GTTGTTGAGT TAATGAAGGG GGATATTACT 
ACCCTTGAGG TTGATGCCAT AGTTAATGCC GCTAACCCGT ACCTTGAACA CGGTGGCGGT
GTAGCTGGGG CAATTGTTAG GAGGGGTGGT TGGATGATTC AGGAGGAGTC GAGGGAGTGG
GTTAAGAAGC ATGGCCCAGT ACCAGTTGGT GGTGTTGCGG TCACTGGGGC TGGTAGGTTG
AAGGCAAGGT ACATTATTCA CACCGTTGGC CCAAGATGCG GCATTGAACC TATTGAGAAG
CTTAATGATG CTGTAGTTAA CTCATTGAGG AAGGCTGAGG AATTGAATAT CGTGAGTATA
GCATTCCCAG CCATTAGTAC AGGGGTCTTC GGTTGCCCCT ATGATGAGGC CGCTAGGATA
ATGGCCAAAG CCATAAGGCG TGAGGCACCT GGATTGAGGA GTGTCAGGTT GATAATAATA
TGTCTTTACG ATGATGAGGC ATTTAATGTA TTCAGCGGTG TATTTAATGA GGAGCTTAAG
GAATTTAAGG AATCTAAGGA TTAA
 
Protein sequence
MPRFKFPNGV VVELMKGDIT TLEVDAIVNA ANPYLEHGGG VAGAIVRRGG WMIQEESREW 
VKKHGPVPVG GVAVTGAGRL KARYIIHTVG PRCGIEPIEK LNDAVVNSLR KAEELNIVSI
AFPAISTGVF GCPYDEAARI MAKAIRREAP GLRSVRLIII CLYDDEAFNV FSGVFNEELK
EFKESKD