Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1293 |
Symbol | |
ID | 5708903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1364869 |
End bp | 1365432 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641275800 |
Product | hypothetical protein |
Protein accession | YP_001541110 |
Protein GI | 159041858 |
COG category | [R] General function prediction only |
COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.0201116 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTAGGT TTAAGTTCCC TAATGGTGTG GTTGTTGAGT TAATGAAGGG GGATATTACT ACCCTTGAGG TTGATGCCAT AGTTAATGCC GCTAACCCGT ACCTTGAACA CGGTGGCGGT GTAGCTGGGG CAATTGTTAG GAGGGGTGGT TGGATGATTC AGGAGGAGTC GAGGGAGTGG GTTAAGAAGC ATGGCCCAGT ACCAGTTGGT GGTGTTGCGG TCACTGGGGC TGGTAGGTTG AAGGCAAGGT ACATTATTCA CACCGTTGGC CCAAGATGCG GCATTGAACC TATTGAGAAG CTTAATGATG CTGTAGTTAA CTCATTGAGG AAGGCTGAGG AATTGAATAT CGTGAGTATA GCATTCCCAG CCATTAGTAC AGGGGTCTTC GGTTGCCCCT ATGATGAGGC CGCTAGGATA ATGGCCAAAG CCATAAGGCG TGAGGCACCT GGATTGAGGA GTGTCAGGTT GATAATAATA TGTCTTTACG ATGATGAGGC ATTTAATGTA TTCAGCGGTG TATTTAATGA GGAGCTTAAG GAATTTAAGG AATCTAAGGA TTAA
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Protein sequence | MPRFKFPNGV VVELMKGDIT TLEVDAIVNA ANPYLEHGGG VAGAIVRRGG WMIQEESREW VKKHGPVPVG GVAVTGAGRL KARYIIHTVG PRCGIEPIEK LNDAVVNSLR KAEELNIVSI AFPAISTGVF GCPYDEAARI MAKAIRREAP GLRSVRLIII CLYDDEAFNV FSGVFNEELK EFKESKD
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