Gene Cmaq_1290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1290 
Symbol 
ID5709971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1362113 
End bp1362688 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID641275797 
Productnucleotide kinase-like protein 
Protein accessionYP_001541107 
Protein GI159041855 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1936] Predicted nucleotide kinase (related to CMP and AMP kinases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.0198607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGATTC TTGTTACTGG TGTTGCTAAG TCAGGTAAGT CAACAATCCT AGGAATACTG 
TCTGAATTAG GGTATAAGGT AATTAATGCA TCAGACCTAC TACTGGGTAG TGGTTGCGTT
AAGTGGAATG AGGATTACCA GTCATTTGAC ATCACTGATA AGGACTGTGC AGCGGACTTG
GTTAATAAGT CTATCTTAAA CTGCGGCGTC AACTGCGCCC TAGAGTCCAT TGCCTATGAG
CTAGTGGACC CCGGCTACGT GGACTTGGTT ATGGTGATTA GGCGTGACCC AATTCAACTA
TATGAGGAGT ACAGTAGGTT AGGGTGGCCC TGTGTGAAGA TTTTCAATAA TACTGTTAGT
GAAGTCACTG GTTCCCACGT TAATGATATT GAGTCGCTGT TTAATGGTAA GGTTAGGCAA
TTGGTTTTCA CGGGTAATAT TGATGAATTA AGGGGCAAGG TCCTCATGGT TATTAACAAT
AAGTTAAGTG AGGAGGTGGA TTGGTTAGTG AAGTATGGTG GTGATGAGAG GCTTCACTCA
ATATTAATGA GTATTGAAGC CTGCCTCACC ACTTAA
 
Protein sequence
MKILVTGVAK SGKSTILGIL SELGYKVINA SDLLLGSGCV KWNEDYQSFD ITDKDCAADL 
VNKSILNCGV NCALESIAYE LVDPGYVDLV MVIRRDPIQL YEEYSRLGWP CVKIFNNTVS
EVTGSHVNDI ESLFNGKVRQ LVFTGNIDEL RGKVLMVINN KLSEEVDWLV KYGGDERLHS
ILMSIEACLT T