Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1289 |
Symbol | |
ID | 5709970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1359193 |
End bp | 1362123 |
Gene Length | 2931 bp |
Protein Length | 976 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641275796 |
Product | Alpha-mannosidase |
Protein accession | YP_001541106 |
Protein GI | 159041854 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0383] Alpha-mannosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.891323 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0327923 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTACTA GGTCTATTGA GGAATTAGGC GCAAGGTTAG TGTTCGTAAT CGCCAGTTCA TTCCGAAACA TAACGCCACT CAACTGGGAT ACGGTTGGTG ATGGGAGGTT TAAGCTAAGT GTTAATGCAG GTAATTCAAG TGAATTAATC GTTATTGGTT ATAGGGGTAG TGCTTTAGTT AGGCTTAATG GTAAGCCTTA CTTTGAACTG GATGGGTACC ATAAGGCCAT TCCCCTACCC AGTGGTTCAC ATACCGTGGA GGCTGAATTC ACACCCTACG CAGCATTCGG TGAATTAGTG GGTATTAATG CCGGTAAACC CTACCTGGTT ACTAGGGATT ACTCAGCGTT GAGGTTTTGG GCGTATGCCT CAAGCACCCT TGAATTAGCC AGGATTATTA ATGATGATGC AGTTAAGGTG GAGTTACTTA AGGCCTTAAC GGAGGCCTTC AGGAAGATTC CCTTCACAAG CGTCTCAAGG GAGCAGTTAA TACTTGCAGC TGAACTATAC GGTATGCCTT GGAGTGAGAG AATTAACCAA ACCATAACCC AGGACTTAGA CTACGTTTTC ACTGAGGCAA GTGGCGGTAA CTTCGATGAG GCCCTTAATG TTTTAAGGGG CCGGCTTAAT GCCCTTTTAC CTAAGTTCGG TAAGGGTGGT TTACTCACTG GTCTTGCCCA CGCCCATATT GATACCGCCT GGTTGTGGAA TTTTGATGAG ACTAGGCGTA AGGTTCTCAG GACCTTCGCC ACCGTTGTCT CATTAATGAG GAGGTTTAAC TTCACTTACA TGCAGAGTGC AGCCCTATAC TACCAGTGGC TTCTTGAGGA TGATCCGGAA TTATTCAATG AGGTTAAGAG ACTTGTTAAT GAGGGTAGGT GGATTCTCGG CGCCGGTTGG GTTGAGGCTG ATGCTAATGT GCTTAGTGGT GAATCATGGG CTAGGCAAAT GCTTTATAGT CAAAGATTCT ACATGAGGCA CTTCGGCAGG GTGGCTGAAG TACTATGGCT ACCGGACACC TTTGGATTCA ATCAAACGTT ACCGCAAATA GCGAGGTTAA GTGGGGTAAA GTTATTTGCA ACGCATAAAG TGTACTGGAA TGATACAAAT AAGTTCCCAT ACAATGTCTT TAATTGGGTT GGACCAGATG GAGATAAGTT ACCTGCAGTA ACCTTCGGTA ACGGTAGGGG TGGTTACAAT AGTGACTTCA CAGTGGCCAG TGTCCTTGAG CAGTGGAGGA ATTGGGTTGA TAAGGATTAC CCAATGCTAT ACAGCTACGG TTACGGTGAC GGTGGCGGTG GACCAACAGT GGAGATGCTG CTTAGGGCTG AGGCCATTAA TGAATTACCA ATACTACCTA AGGTTGATTT AGTAACCGGC ATATCCAAGT ACCTTGATGC TAAACCAATC AATGAGTGGA GGGGTGAATT ATACTTAGAA ACCCATAGAG GCACATTAAC CTCCCACTCC AAGATGAAGC TCCTTAATAG GAAGTGCGAG ATTGCCTTAA GGGAGGCTGA GCTCTGGAGT GCATTAGCAG GCACCTATGA TGCGGTTAAA TTCAGTGAAC TCTGGAAGAC TCTACTCAAG GATCAATTCC ACGATGTGTT ACCGGGATCA GCAATAAGGG AAGTTTACCA GAAGGTTGTT TACCAGGAGT TAGAGCAGGT GATAAAGGAG GCTAATGAAA TAGCCGTGGA GGCGGCTAGG AGGATTGCAG GTGAAGGTGA AGCCCTATTA GCCTTCAATT CACTACCATG GGATAGGGTT GACTACGTGG TTGTTAATGA ACCAGTTGAG GGTGGTCAAA GGATTGATGA AGGGTACTTG ATCAGGGTTA AGGTACCCAG TGTGGGTTAC GCCACGGTTA GGCATATTGA ACCCAGTGAA CCAGTGAGGA TTACTGAGGA TTCTGATGGA TACGTTATGG AGAATAGGTT AATTAAGGTT AGGCTTAGTA AGAATGGTAG ACTCCTCAGC GTGATTGATA AGGGGAGTGG TAGGGAGTTA CTAAGGGAGC CCAGTAATGT ACTGGTGGCT TACGAGAATA TGCCTGGTTG GAGTGATGCA TGGGATATTG AGAAGGGTTA TGAGGAAACC AGCTTCACCC TAAACGCCTC AGAGTCCAGT GTTGAATCAA GGGGCCCATT AATGGCTTCA GTTAAGTTTA AGTATGACTT TAGGCGTAGT AGCATTATTC AGGAGGTTAG GCTCTACGCA GACTCAAAGA GGCTCGACTT CAAGACAACC ATTAAGCTTA TTGACAGGGA GTTACTGTAT AAGGCCTGGT TCCACTTCGA CTTAAACACT GATGAAGCCT ACTTCGATGC ACCATACACA CCCATTAAGA GACCCACCGT CACTAACACC TCATGGGATT TAGCCCGCTT CGAGGTTCCA ATGCATAAGT GGGTTAGCCT CAGTGAATGC TGCTTCGGTG CGGCGCTCCT TAATGACGGT AAGTACGCCG TTAGCGTTAA GGGCTCCAGT GTAGGTGTTA CACTCGCCAA GACCCCAATA TTCCCAGACC CCTCCACTGA CCTTGAGGAG GTTACCTTCA CGTATAGTTT AATGCCTCAT GGAGGCGACT TAATTGAGGT TCATAGAGCC GCCTGGGAGC TTAACGCACC AATGCTGGTT ATTAAGGGTA GGCCAGGTGA GGCTAGCTTA ATTAGGCTTA GGCCAAGTAA CCTAACGCTT GAGGCAGTGA AGGTGAGTGA GGATGATTCA AAGGCCTTGG TGATTAGGGT GAGTGAGTTA ATTAATGGTA GGGGTATTGG TGAATTAGAG TTACCGTTTA AGCCCAGTGA GGCCTATGAG ACTAACCTAA TAGAAACCAC TAGAAGCAGT GATGGCATTG AGGTTACTGG GAGCATTGTG AGGTTTAGGT ATGGGAATAG GCAGGTGAAG TCAATTATAG TTAAGTGGTG A
|
Protein sequence | MVTRSIEELG ARLVFVIASS FRNITPLNWD TVGDGRFKLS VNAGNSSELI VIGYRGSALV RLNGKPYFEL DGYHKAIPLP SGSHTVEAEF TPYAAFGELV GINAGKPYLV TRDYSALRFW AYASSTLELA RIINDDAVKV ELLKALTEAF RKIPFTSVSR EQLILAAELY GMPWSERINQ TITQDLDYVF TEASGGNFDE ALNVLRGRLN ALLPKFGKGG LLTGLAHAHI DTAWLWNFDE TRRKVLRTFA TVVSLMRRFN FTYMQSAALY YQWLLEDDPE LFNEVKRLVN EGRWILGAGW VEADANVLSG ESWARQMLYS QRFYMRHFGR VAEVLWLPDT FGFNQTLPQI ARLSGVKLFA THKVYWNDTN KFPYNVFNWV GPDGDKLPAV TFGNGRGGYN SDFTVASVLE QWRNWVDKDY PMLYSYGYGD GGGGPTVEML LRAEAINELP ILPKVDLVTG ISKYLDAKPI NEWRGELYLE THRGTLTSHS KMKLLNRKCE IALREAELWS ALAGTYDAVK FSELWKTLLK DQFHDVLPGS AIREVYQKVV YQELEQVIKE ANEIAVEAAR RIAGEGEALL AFNSLPWDRV DYVVVNEPVE GGQRIDEGYL IRVKVPSVGY ATVRHIEPSE PVRITEDSDG YVMENRLIKV RLSKNGRLLS VIDKGSGREL LREPSNVLVA YENMPGWSDA WDIEKGYEET SFTLNASESS VESRGPLMAS VKFKYDFRRS SIIQEVRLYA DSKRLDFKTT IKLIDRELLY KAWFHFDLNT DEAYFDAPYT PIKRPTVTNT SWDLARFEVP MHKWVSLSEC CFGAALLNDG KYAVSVKGSS VGVTLAKTPI FPDPSTDLEE VTFTYSLMPH GGDLIEVHRA AWELNAPMLV IKGRPGEASL IRLRPSNLTL EAVKVSEDDS KALVIRVSEL INGRGIGELE LPFKPSEAYE TNLIETTRSS DGIEVTGSIV RFRYGNRQVK SIIVKW
|
| |