Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1285 |
Symbol | |
ID | 5708471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1354877 |
End bp | 1355455 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275791 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_001541102 |
Protein GI | 159041850 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.469864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00228345 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGTATTATG CATTATTAAT AACTGGATTA GCCTATGTGG CTGTAACACT GATTGTATGT ATTAAACCCA TTAACAGTGT TGATTCAGTT ATTGCCTCAT TAATTGCAGG TATTAATAGG CCTAGGCCAC TGGACTATGC CGCAGTAGTA TTGACTAAAT ACGGTAGATT CTACACATGG GGTCTCGTGG ACCTGGGGCT ACTGGTACTG AGGCTGTGGA TCCCCTTCGC TGAGTTAACT TTATCAATAA TGTTAGCCTA TATTATTGGT GGGGTAACTA GGCTACTTGT GAAGCGTCGA AGACCCTATG AGGCTGGTTA CGGTAAACCA ATACTTGCGG CCAGTGGGTT CTCATACCCC AGTGGCCATG CCGCAGTGGT CTTCAGTGGG GCATTAGTAG CATTAATGAC GCTTAATAAG ACTGTATCAC TAATACTCCT AGCTGAGGCA ATACTGGTGA CGGCTTCTAG GGTTTATTTG AATGCGCATT ACTTAACCGA CGTAATAGGT GGTGTACTGC TTGGTTTAAC TTCAGGGTTC CTTGCCATTG CATTAACACC AATCCTAATA GTATCTTAA
|
Protein sequence | MYYALLITGL AYVAVTLIVC IKPINSVDSV IASLIAGINR PRPLDYAAVV LTKYGRFYTW GLVDLGLLVL RLWIPFAELT LSIMLAYIIG GVTRLLVKRR RPYEAGYGKP ILAASGFSYP SGHAAVVFSG ALVALMTLNK TVSLILLAEA ILVTASRVYL NAHYLTDVIG GVLLGLTSGF LAIALTPILI VS
|
| |