| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1280 |
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| Symbol | |
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| ID | 5708489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1348898 |
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| End bp | 1350871 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641275786 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_001541097 |
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| Protein GI | 159041845 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00000385592 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATGAGT CCATTCTCCC CACCTTAATA GCCTTAATGA CACTAGTGCC CATACTGTTT
GCTTCACCAA TGTCAGTGTA CTGGGTTATT GAGCAGGATA ACCGTAAGGC ACGCCCACTG
GAGTATCTTG CTGTGACTGG GCTTGGTGTG GCTGCATTAG TTTCAACATA CATAGCCATT
GCGTACCCGA TGAAGACCAT TATTTACTCA TACCCATGGA TCTCGGTGCC AGGTATCTTC
ACAATGTACG TGTCATTCAT AGTTGACTTC CTGAGCAGGT ATATGGGGTT ATTAACAGCT
TGGCTTGCCT TCATAATAGG TGTATACAGC CTGGAGTACA TGGCTAATGA CTATAGGCTT
GGCTGGTTCT GGTTCTTCTA CAACACCTTC GCAGCATCAA TGCTACTGCT CGTTTACTCC
AATAACCTAC TCCTGTTGTT CATAGGGTGG GAGGGATTAG GTCTAAGTTC ATGGGCGTTG
ATAGGTAATT GGTTCAGAGA TGATGATGAA ATATCCTTCG TTGGGAAGCT GGGTGACATG
GTGCTTGGTA AGCCAGCGTG GACTACACCA TCCTACGCCG CCTATAGGGC TATTGTTACA
ATAAGGTTCG GTGACATGCC CATGCTGGGT GCCTTAGCGG CAATAGGGAT ATTTGGAGGC
AGCCTAGACT TCAATATGAT AAACTGGAGT CACTTAATAA GCGTACTGGG TACCGCTGGA
ACAGCCATAG TTCTCATCGC CTTCCTGCTT GGCCCATTCA CTAAGAGCGC TCAATTCCCA
TTCAATGACT GGCTCCTCAC AGCCATGACT GGTCCAACCA GTGTTTCCGC ATTACTTCAC
TCAGCCACAA TGGTTGCTGC AGGTGTTTAC GTATTCATGA GACTTACCCT ATCCCTATAC
GGTGCAGGGG TGTTAACATC AAGTGGAGTA TTGGTAACCT ACCTGGTGGT TATCTATATT
GGTTTACTAA CAGCCTTACT TGGTTCATTA TTCGCCTTAG CCGTTGATGA GAGGAAAGTT
ATCCTAGCTG GTTCAACCAT GGCGTCACTG GGGTTAATGA TGGGTATAAC CGCTGTTGCA
CCTTACTTAA ACAATGCAGT AACCATCGGT GAGTACGTGC TTCCTACAGC TGTACTGGTT
GCCTTCCTAT ACTTAATAAT ACACGCCTTA TCTAAGGCTA CATTATTCCT AGTCAGTGGT
CACTTGATTC ATGAGACTGG GACCAGGTTT AATGTGGGTG ATGTTGAGTT GGCTAAGAGG
ATGAAACTAG CCTTCTACTC AACAATAGCC GCTGCAATAA CCCTGGGAGG CATTCCACCG
TTTGCCGGTT ACTGGGTTCA CGCCTCAATG GATGACTTAG TCTCCACTGT GAGTCAAACA
GTGGGCTGGG GTTCATATGC ACTACTGATA CTTGCAAGCA TAGCCTACGT AGCCTTCCTA
GCCAGATTCA CTTCCCTCAA CTTCATTAAG GGGGGTAGGG TGGAGCATAG GGAGTCTGGG
CACGGTGGAT TAATAATGGC TATATCATAC ACCTTAACGG CCACAGTGGC CCTAGCCACA
GTGGCAATAC CATTTACTCT ACATGTACCA TCAATACTGG TTGAACCTGG CTATGATGCG
TATGTAGTGG GTATTGGTGT ATTCCTCTGG GTAATCTTCA TTACCGCGCT TATTAAACCA
AGGGCACCAT CATTAAGTAA TTTAACAACC ATTTTTGAAC GTAGGTATTA CATACAGGCA
TTCATGGATG TTATCCTAGC GGGCTTTGGG AGAGCCCTCA TAGAGTTCGC CTACTTAATA
AGCCATGGAA TTGATGTACT CTTCAACACG CTTATACCAT CATTGTTCAC AGGTTTCTCA
AGGGTTATTA GGAGGATTCA GGTTGGTTTA CTGAACCAGT ACGTTAGGTA CATTTACCTG
GCGACTGTGG TAATACTATT AATAGTATTG GTGCTGGTGA TGGTGTATGG TTGA
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| Protein sequence | MYESILPTLI ALMTLVPILF ASPMSVYWVI EQDNRKARPL EYLAVTGLGV AALVSTYIAI
AYPMKTIIYS YPWISVPGIF TMYVSFIVDF LSRYMGLLTA WLAFIIGVYS LEYMANDYRL
GWFWFFYNTF AASMLLLVYS NNLLLLFIGW EGLGLSSWAL IGNWFRDDDE ISFVGKLGDM
VLGKPAWTTP SYAAYRAIVT IRFGDMPMLG ALAAIGIFGG SLDFNMINWS HLISVLGTAG
TAIVLIAFLL GPFTKSAQFP FNDWLLTAMT GPTSVSALLH SATMVAAGVY VFMRLTLSLY
GAGVLTSSGV LVTYLVVIYI GLLTALLGSL FALAVDERKV ILAGSTMASL GLMMGITAVA
PYLNNAVTIG EYVLPTAVLV AFLYLIIHAL SKATLFLVSG HLIHETGTRF NVGDVELAKR
MKLAFYSTIA AAITLGGIPP FAGYWVHASM DDLVSTVSQT VGWGSYALLI LASIAYVAFL
ARFTSLNFIK GGRVEHRESG HGGLIMAISY TLTATVALAT VAIPFTLHVP SILVEPGYDA
YVVGIGVFLW VIFITALIKP RAPSLSNLTT IFERRYYIQA FMDVILAGFG RALIEFAYLI
SHGIDVLFNT LIPSLFTGFS RVIRRIQVGL LNQYVRYIYL ATVVILLIVL VLVMVYG
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