Gene Cmaq_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1260 
Symbol 
ID5709890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1331875 
End bp1332885 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content46% 
IMG OID641275766 
Product6-phosphofructokinase 
Protein accessionYP_001541077 
Protein GI159041825 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02483] phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000838364 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000440972 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGAGGATTG GAGTATTGAC TGGAGGTGGG GATGCCCCTG GGTTAAATAT TGCTGTTTAC 
TCTTTCATTA AGTTGGCTGA GAGGAATCAT GAGGTTTATG TAATATACCA TGGTTGGAGG
GGGTTGCTTG AGAGGGAGGT TAGGAGAATA ACGTCACTGG ACCTAGTGGA CTTCGCCTTC
TCAGGTGGAA CATACATTAA GACCTCTAGG ACTAATCCAT TTAAGGATGA GGAGAGGGCT
AGGTTACTTG AGAGGAATGT TAAGGAACTC GGCCTAGATG TTGTAGTGGC TATTGGCGGT
GATGATACAT TGGGTGCCGC AGGTGAGGCG CAGAGGAGGG GTATATTGAA TGCAGTGGGT
ATTCCTAAGA CTATTGATAA TGATGTTTTT GGTACTGATT TTACTATTGG TTTTGATTCT
GCTGTTAATG CTGCTGTTAA TGTTACTGAG TCCTTTAAAA CCACCTTAAT CTCCCATGAG
AGGATTGGTG TAGTGGAGGT TATGGGTAGG GAGGCTGGAT GGGTAGCATT ACACACTGGA
CTAGCAACAA TGGCAGACGC AACACTAATA CCGGAGAAGC AGGTTAGTTG GGATTCAGTG
GTAAGGAGGG TTAAGGAGGC CTACGAGAAG AAGCACTGGG CCCTCGTTGT GGTTTCAGAG
GGTATTAAGG AGTACGAGGG GCCAAGGGAT GAATTCGGCC ATGCTAGGCT TGGCGGTGTA
GGTAATGAGT TAGCTGATTA CATTGAAAAG GCCACTGGAA TAGAGACTAG GGCAGTTATA
CCAGGGCATA TAATAAGGGG TGTGTCTCCA TCAGCCTTCG ATAGGACTCT AGCCATAAGA
TACGCCACAG CCGCCTATGA GGCTATTGAG AACGATAGAT TCGGCATAAT GGTGGCCTAC
AGTAACGGTG AGTTAACGCA CGTGCCCATT GTTGAGGTTG TGGGTAAGAA TAAGCTAGTT
AGTGGTTATT GGTTAAGGCT CTATGAAACC TACTGGGGGG ACTTAAATTA A
 
Protein sequence
MRIGVLTGGG DAPGLNIAVY SFIKLAERNH EVYVIYHGWR GLLEREVRRI TSLDLVDFAF 
SGGTYIKTSR TNPFKDEERA RLLERNVKEL GLDVVVAIGG DDTLGAAGEA QRRGILNAVG
IPKTIDNDVF GTDFTIGFDS AVNAAVNVTE SFKTTLISHE RIGVVEVMGR EAGWVALHTG
LATMADATLI PEKQVSWDSV VRRVKEAYEK KHWALVVVSE GIKEYEGPRD EFGHARLGGV
GNELADYIEK ATGIETRAVI PGHIIRGVSP SAFDRTLAIR YATAAYEAIE NDRFGIMVAY
SNGELTHVPI VEVVGKNKLV SGYWLRLYET YWGDLN