| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1257 |
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| Symbol | |
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| ID | 5708699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1328322 |
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| End bp | 1329050 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275763 |
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| Product | threonyl/alanyl tRNA synthetase SAD |
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| Protein accession | YP_001541074 |
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| Protein GI | 159041822 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2872] Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.018938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000000057233 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAACTA TTCACGTGTA TCAACAGGAT AGTTACCTTA AGGAGGTGGA TGCGAAGGTT
ATTGCTGTTG ATGGTAGTAA CGTTATCCTT GATAAAACTA TAATACACCC AAGTAGTGGT
GGTGTTGTTC ATGATACTGG CTTAATCATT ACTAAGGGTG AGCAGTACAG GATTATTGAT
GCTGTACATA AGAGGGATAC TGATGATGTT ATACACGTAC TGGATAGGAG TCCTCAACTT
AAGTATGGTG ATGATGTTAA GGTTGTATTA GATTGGGATA GGCGTTACAG GTTAATGAGA
CTCCACACTG CATCACACAT AATGGCTGGG ATAGCTTACT CAAAGTACAA TGCCCTAGTA
ACTGGGGGTG ATATTCAACC AGACTACGCT AGGGATGATT ATAGTCTCAC AGCCGGTGGT
GAGGAGCTTA GGAGGATATT CAATGAAATA GTGACTGAGG CTAATGAGAT TGTTAAGAAG
GGTATTGAGG TTAAGGTTTA CTGGATGCCG CGTGAGGAGG CGCTTAAGGT ACCAGGTATA
GTTAAGTTAG CTGAGAGGGA GCCGCCGCCT GGTGATAAGT GGAGGATTGT TGAAATACCT
GGTGTTGATG TTCAGGCTGA TGGTGGTCCA CATGTCGCTA ATACTAGGGA GATTGGGGAA
ATCATTATTC AGAAGATTGA GAATAGGGGT AGGAATAAGA AGAGGATTTA CTTCACTGTT
AAGCCGTAG
|
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| Protein sequence | MPTIHVYQQD SYLKEVDAKV IAVDGSNVIL DKTIIHPSSG GVVHDTGLII TKGEQYRIID
AVHKRDTDDV IHVLDRSPQL KYGDDVKVVL DWDRRYRLMR LHTASHIMAG IAYSKYNALV
TGGDIQPDYA RDDYSLTAGG EELRRIFNEI VTEANEIVKK GIEVKVYWMP REEALKVPGI
VKLAEREPPP GDKWRIVEIP GVDVQADGGP HVANTREIGE IIIQKIENRG RNKKRIYFTV
KP
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