| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1254 |
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| Symbol | |
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| ID | 5709253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1324814 |
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| End bp | 1326262 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275760 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001541071 |
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| Protein GI | 159041819 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000000145561 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGCGTCTA AGCGATTCAT AGAGATGGTG GAACCGCTCT TAACGCTAAT GCCCACTGTC
CCCAGGCCCA ATAGGCCGGT TACCCTGGGT AGTAGGCTAA TATGGACCTT CCTAGCGGCT
ACAGTTTACC TACTCCTATC AGTAACGCCG CTATACGGTA TTGTGGCTTC ATCAAGTAGC
CCGCTCTTCA ACCCGCTGGT GGCTATAATA TTCGCCTCAA CCAACGGTAC ATTGGCTCAA
CTGGGTATAG GCCCAATAAT AATAGCTGGA ATAATAATGG AGCTTGTAGC CTTCTCTGAG
TTAATGGATG TTGACTTAAA TGACCCTAAG GATCAAGCAA GGTTCACTGC ATTAACGAAG
CTTGTAGCCG TGATAATAGC CATGTTTGAG GGAGCATTCA TAATGTCAAC CCACCAGTTA
ACCGTAGCCA ACGCTGGATT AGCCTTCATT GTGTGGCTTC AAATGTTGTT CGGAGCCGTA
ATAGTTATAC TGCTTGATGA CTTAATATCC AAGGGATGGG GTATTGGAAG CGGCATATCA
TTATTCATAC TCATAAGCAT AATTAGGTCC ATTTTCCAAT CCACATTCAT GCCTGTAACC
GTGGGTGCAG GGGAGTTACT AGGTATTATA CCTGCCCTAG TGGCTGCAGT ATACAGCGCC
GCAGTATCCC ACACGCTTGC ACCATTATTA TCCATAGTTT ATAGATTCAA CCTACCCGGC
CTAATAGGCT TAATCGCAAC AATAGTCCTA GGTGGCTTCA TAGCATACGT TGAGTTAATG
GAGGTTAGGA TACCGTTATC CTTCGTGCAG TACGGTGGAT ACAAGATGTC GTACCCATTC
AAGGTAATGT ACGTCTCAGT CCTACCCATA ATATTCACAG CATACACAGT GGCGTTAATA
TATAATGGAC TCTACTTCAT TTGGACAACA TATAATCCCC ATAACGCTAA CGCATTATTA
AATTCAATAG CCTGCATAAG GGTTATTACA ACCGCTAAAT TCGGTACTAT TAATGAACCA
TGTCCATCAT CCTTAATATA CTACTTCACC GTGGTGCCGT ATAACATTAC CCCACAGTAC
GTGGTGGTTC ACATACTCAT GTACGTCGTG CTCTCAGTGG TCTTCGCCTA CCTATGGGTT
AATTTAGCTG GTTTAAGCGC CGAGGATCAG GCCAGGACCA TGGTTTCAAG CGGCTTATCA
ATACCAGGCT TCAGGGCATC AGCGAGGTCG CTTGCAGTGC ACTTGAAGAG GTACGTTAAT
TCACTAACCT TCACCAGCGG CTTACTGGCT GGTTTCATTG CAGCCCTTGG TGATGTATTA
GGTGTATATG GTACTGGCAT AGGCCTAATA CTAATGGTGG AGATAATAAT ACAGTACTAC
ACGATAGCGA TGCAGGAGCA GTTGTTTGAG GCTTATCCAG GGCTTAAGAG GATTCTAGGT
GTTGAGTAA
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| Protein sequence | MASKRFIEMV EPLLTLMPTV PRPNRPVTLG SRLIWTFLAA TVYLLLSVTP LYGIVASSSS
PLFNPLVAII FASTNGTLAQ LGIGPIIIAG IIMELVAFSE LMDVDLNDPK DQARFTALTK
LVAVIIAMFE GAFIMSTHQL TVANAGLAFI VWLQMLFGAV IVILLDDLIS KGWGIGSGIS
LFILISIIRS IFQSTFMPVT VGAGELLGII PALVAAVYSA AVSHTLAPLL SIVYRFNLPG
LIGLIATIVL GGFIAYVELM EVRIPLSFVQ YGGYKMSYPF KVMYVSVLPI IFTAYTVALI
YNGLYFIWTT YNPHNANALL NSIACIRVIT TAKFGTINEP CPSSLIYYFT VVPYNITPQY
VVVHILMYVV LSVVFAYLWV NLAGLSAEDQ ARTMVSSGLS IPGFRASARS LAVHLKRYVN
SLTFTSGLLA GFIAALGDVL GVYGTGIGLI LMVEIIIQYY TIAMQEQLFE AYPGLKRILG
VE
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