| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1242 |
|---|
| Symbol | |
|---|
| ID | 5709468 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1312451 |
|---|
| End bp | 1313593 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641275747 |
|---|
| Product | acetyl-CoA C-acyltransferase |
|---|
| Protein accession | YP_001541059 |
|---|
| Protein GI | 159041807 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0529567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.0106911 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTT CGGCATTAGG CTATATAAAT GGAGTACACA TTATTCCCCC AGGCAGGTAT
TATGATAAGG GTTATAGGGA ATTATTCGCT GAGGCTGCCT TAAAGGCTCT TGAATCTGCA
GGTAACCCTG ACATTAAGGC AATATACATT GCCTCAGCCC TATCTGAACT TACCGGTGAG
CAGATGGCTA TAGGTAACGT CCTTAGGGAT TACTCAGGCA TTAAGAATGC CCCATCCATA
AGGGTTGAGA ATGGTGATGG CTCAGGGGGC TTCGCATTCA TGGTTGCTTT AAACCACGTG
GCATCAATGA GTAATGGATG CGTACTACTG GTTGGTGTTG ATAAGCCTCA TGAGGTTACT
TCACTTAAGC AGAATAAGTA CGCCTCATAC CTACTTGACT CCGATTACGA ATCATACTTC
GGAGCAACCC CAGTGGTCTT GGCTGCATTA ATGGCTAAGC AGTACCTGAG GAATTATGAG
TATAAGTATG AGGACTTAGC CACATGGGCT ATTAAAATGC ATGAGAGGGG TGCGAAGAAT
CCCTTCGCCT ACTTTAAGAG GGCGGCTAAG CTAAAGGATG TTCTGGATTC CGAGCTTGTT
GCAGACCCAT TAAGGCTCTA CGATGTATCA CCCTTCGTTG ACGGCGCAGC GGCCCTAGTA
CTCTGCAGTA AACCTAATGC CAGGGATCAG GCAGTGGGGG TGTTGGGTTA CGGGTTCGGT
GCATCAAACT CATACTTCGC CTCAAGGAAC GACTACACGG TATTAATGTC TGTGACTGAG
GCTGTTAAGG CAATTAACCC GCTCAGTGAC TTCAACGGTA TAGTGAGTGT CCACGATACT
TATAGTATAC TCGGTGTATT GGCGTTGGAA TCCCTGGGAT TATGCAAGAG GGGGAGTGCC
TTAAGGCTCC TTAATGAGGG TTACTTTGAC CCAGGGGGTA AGGTTATGGT TAACTTAGAC
GGTGGATTAA AGGCTGTGGG TAATTCAATG GGTGCCTCAG GTGTTTACCA ATTAGCCAGC
GTCACAATGC AGCTTAGGGG TGATAAACCA TTTAACGGCC TAAACGCCGA GGCAGCGGTG
GTTGAGGATA TGGTTGGTGT GGATCAGGAG AGTGTAGTCT TCATGCTTAA GGTGGTGAAG
TAG
|
|---|
| Protein sequence | MSISALGYIN GVHIIPPGRY YDKGYRELFA EAALKALESA GNPDIKAIYI ASALSELTGE
QMAIGNVLRD YSGIKNAPSI RVENGDGSGG FAFMVALNHV ASMSNGCVLL VGVDKPHEVT
SLKQNKYASY LLDSDYESYF GATPVVLAAL MAKQYLRNYE YKYEDLATWA IKMHERGAKN
PFAYFKRAAK LKDVLDSELV ADPLRLYDVS PFVDGAAALV LCSKPNARDQ AVGVLGYGFG
ASNSYFASRN DYTVLMSVTE AVKAINPLSD FNGIVSVHDT YSILGVLALE SLGLCKRGSA
LRLLNEGYFD PGGKVMVNLD GGLKAVGNSM GASGVYQLAS VTMQLRGDKP FNGLNAEAAV
VEDMVGVDQE SVVFMLKVVK
|
|---|
| |