Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1231 |
Symbol | |
ID | 5709727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1300954 |
End bp | 1301568 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275735 |
Product | hypothetical protein |
Protein accession | YP_001541048 |
Protein GI | 159041796 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0770678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.324963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTACGC TGCTTTACTA TACGGCATTA GTGTTCATGA TTAGTCTAGT GAGTAATGCT ACCCCATTCT TTGGTGCAGC CTACACTGTG TACGCATCCA TAGTGTTAAT GAACCTTAAG CCCAATGCCC CAGTGGTAAT ACTCTTCATA GTTGTTACTG CCCTTGGAGC AGCCTTAGCT AAGAACACAA TGTACCTAAT TGGCGTAGCC TTAAGGAGGC CTATGGCTAG AAGCAGGAAC ATGATCTTCC TAAGGGGGTT ACTTAGATTA GGCTTCCTCT GGTTAATCAT AATTGTGTTA GCAGTAATAC CTGGAATACC CCTTGATGAC TACATCTACG TGGGTACTGG GGCAGCTGGG GCTAGTTTAA GTAGGCTTAA TGCCTACGTG TTTTTAGGGA AACTGATTAA AAGCTCCATT GAAATACCCA TTGAATTAAC CCTACTGAAC ACGATATATA ATGTAACATC AACCCTCGGC CTAAGTAGGC TTGAATTCCA GTTAATCTTC GCCATAGTCT TCACCGCATT AGGCGTGGTG TTGTATAAGT TGGATTGGTG GAGTATGTAT AATTGGCTTA GAAGGAGGAT TAGTGTCCTA CCTGACATTA ATTAA
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Protein sequence | MSTLLYYTAL VFMISLVSNA TPFFGAAYTV YASIVLMNLK PNAPVVILFI VVTALGAALA KNTMYLIGVA LRRPMARSRN MIFLRGLLRL GFLWLIIIVL AVIPGIPLDD YIYVGTGAAG ASLSRLNAYV FLGKLIKSSI EIPIELTLLN TIYNVTSTLG LSRLEFQLIF AIVFTALGVV LYKLDWWSMY NWLRRRISVL PDIN
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