Gene Cmaq_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1231 
Symbol 
ID5709727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1300954 
End bp1301568 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content43% 
IMG OID641275735 
Producthypothetical protein 
Protein accessionYP_001541048 
Protein GI159041796 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0770678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.324963 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTACGC TGCTTTACTA TACGGCATTA GTGTTCATGA TTAGTCTAGT GAGTAATGCT 
ACCCCATTCT TTGGTGCAGC CTACACTGTG TACGCATCCA TAGTGTTAAT GAACCTTAAG
CCCAATGCCC CAGTGGTAAT ACTCTTCATA GTTGTTACTG CCCTTGGAGC AGCCTTAGCT
AAGAACACAA TGTACCTAAT TGGCGTAGCC TTAAGGAGGC CTATGGCTAG AAGCAGGAAC
ATGATCTTCC TAAGGGGGTT ACTTAGATTA GGCTTCCTCT GGTTAATCAT AATTGTGTTA
GCAGTAATAC CTGGAATACC CCTTGATGAC TACATCTACG TGGGTACTGG GGCAGCTGGG
GCTAGTTTAA GTAGGCTTAA TGCCTACGTG TTTTTAGGGA AACTGATTAA AAGCTCCATT
GAAATACCCA TTGAATTAAC CCTACTGAAC ACGATATATA ATGTAACATC AACCCTCGGC
CTAAGTAGGC TTGAATTCCA GTTAATCTTC GCCATAGTCT TCACCGCATT AGGCGTGGTG
TTGTATAAGT TGGATTGGTG GAGTATGTAT AATTGGCTTA GAAGGAGGAT TAGTGTCCTA
CCTGACATTA ATTAA
 
Protein sequence
MSTLLYYTAL VFMISLVSNA TPFFGAAYTV YASIVLMNLK PNAPVVILFI VVTALGAALA 
KNTMYLIGVA LRRPMARSRN MIFLRGLLRL GFLWLIIIVL AVIPGIPLDD YIYVGTGAAG
ASLSRLNAYV FLGKLIKSSI EIPIELTLLN TIYNVTSTLG LSRLEFQLIF AIVFTALGVV
LYKLDWWSMY NWLRRRISVL PDIN