| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1230 |
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| Symbol | |
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| ID | 5709726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1300235 |
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| End bp | 1300957 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641275734 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001541047 |
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| Protein GI | 159041795 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.22369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.419134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGTG GGAAGAGGGT AATCATAGCT GGGGCTGGGC CTGGCCTAGG TTCAGCAACA
GCCTACCTGG CCTTAATTAA CGGCGCATCA GTGGTTATGG TGGCTAGAAA TGAGGAGAGG
CTAAGGAGTT TGAAGGCTAT GTTATCGAAG TACGGTAGGG TGGAGGCTGT TAAAGGGGAC
TTAAGCACCA TGAGTGGTGC TGAGGATGCC GTTAAGAGGG CCTATGGAAT CCTCGGCGGC
ATTGATGGTG TTGTAACTGT GCTTGGTGGC TATACTGAGG CATCCATTAG TGAGCTCACT
GAGGATTCAT TATTCAACAT GCTTAGGGTT AATTTAGCAG CTCACTTATT CACGGTTAAG
GCCGCTGTTC AATTAATGAA CCGTGGCTCA ATAGTCATGG TTACCGCAAT ATGGGGTCCA
TACTTGAATT GGCCTAATCG TGTTGCCTAC GTAGCCTCTA AGGCGGCGTT ATCCAGGGTT
GTTGAGACCC TTGCCTCAGA ATTACTCAGT AGGGGTATTA GGGTTAATGC AGTGGCTCCA
GGGGGTATTA GGCGTGATTT TAGGCCTGAG AGGGATTGGA GGAGTACTAG GAGTATTGGT
GATTCAAGTG CACCGCCTGA GGATATTGCT AATATAATTA TTTGGCTGCT CTCGGATCAG
TCGGAGTGGG TTAATGGCGC GGTTATACCA GCTGATGGTG GGTTTAGGTT GAGGCAGCGT
TAA
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| Protein sequence | MLSGKRVIIA GAGPGLGSAT AYLALINGAS VVMVARNEER LRSLKAMLSK YGRVEAVKGD
LSTMSGAEDA VKRAYGILGG IDGVVTVLGG YTEASISELT EDSLFNMLRV NLAAHLFTVK
AAVQLMNRGS IVMVTAIWGP YLNWPNRVAY VASKAALSRV VETLASELLS RGIRVNAVAP
GGIRRDFRPE RDWRSTRSIG DSSAPPEDIA NIIIWLLSDQ SEWVNGAVIP ADGGFRLRQR
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