| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1229 |
|---|
| Symbol | |
|---|
| ID | 5709712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1299467 |
|---|
| End bp | 1300129 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641275733 |
|---|
| Product | oxidoreductase molybdopterin binding |
|---|
| Protein accession | YP_001541046 |
|---|
| Protein GI | 159041794 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00326003 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.661197 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTAATT GGGATGAGGT ATTTAAGTTG GCGTTAAGTA GGGAGTGCAG TAGGGTTACG
TATAGTAGGG AGTGGCCCCC TGAGCAGAGG AGGATTAAGG GATTCATTAT ATATAATGTC
TATGATCCAC CTGATGTAAG GCTTGAGGAC TATGAATTAT CATTCACAGG CCTAGTGGAG
AGGGAGGTTA AGGTTAGTTA CCTGGATATT CTAACTAAGT TACCGTGCGT GGATCTTACC
GCTGACTTCC ACTGCGTCAC TGGGTGGAGT ATTAGTAATG TGTCTTGGAG GGGTGTTAAG
GTGAAGGATA TTGCACCTAA GCCCCTTACT AATGCAAGGT ATGCCTTAGT GATTGGGGCT
GATGGTTACA CAACCAACAT ACCCATTAGC GCATTAATGG AGGATACGTC AATAGTGGCC
TACGCTATGA ATGGGTCAAT ATTAAGTAGG GATCATGGAT TCCCCCTCAG GTTAGTGATA
CCCAGTAGGT ATGGTTGGAA GTCAGCTAAG TACATTAAGG AGGTGAGGCT TATTGATGAG
GTTCAATTAG GTTACTGGGA AGCGTTGGGT TACCACGATA ATGGGGATCC ATGGCTGGAG
GAGAGGTTTA GGGGTATTGA GGAGAGGCAT AAGCCCAGGA GGGGTGTTAA GGTTGAGAAG
TAG
|
|---|
| Protein sequence | MVNWDEVFKL ALSRECSRVT YSREWPPEQR RIKGFIIYNV YDPPDVRLED YELSFTGLVE
REVKVSYLDI LTKLPCVDLT ADFHCVTGWS ISNVSWRGVK VKDIAPKPLT NARYALVIGA
DGYTTNIPIS ALMEDTSIVA YAMNGSILSR DHGFPLRLVI PSRYGWKSAK YIKEVRLIDE
VQLGYWEALG YHDNGDPWLE ERFRGIEERH KPRRGVKVEK
|
|---|
| |