| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1224 |
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| Symbol | |
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| ID | 5710113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1294955 |
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| End bp | 1295647 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275728 |
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| Product | hypothetical protein |
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| Protein accession | YP_001541041 |
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| Protein GI | 159041789 |
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| COG category | [H] Coenzyme transport and metabolism
[K] Transcription |
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| COG ID | [COG1339] Transcriptional regulator of a riboflavin/FAD biosynthetic operon |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000029199 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.751406 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATAAGC AAGTTAATGT GGTTAATTAC AGGGAATTGA AGAAGATACC TTACATACTT
CTCCTCCTCC AGAATGGGGT AAATGACCAC GACTTCACTA GGATTAGTGT AAGCGACTTA
TCAAAGCAAA TGGGCACTAC ACCTCAGAAC ATATCCAAGG TGCTTAGGAG ACTGGAGAGG
GAGGGGTACA TTGTGAGGAG TAGTGTTAAA GGTGAGGTGA GTGTAATGCT TAGTGAGAAG
GGCAGTGCCT TATTAAGGAA CCTAATGGAC CTTATGGAGA ACCTACTTGG GAAGAACATA
ACCATAGTAC TAAGAGGCAT TGTGGTAACA GGCTTTGGGG AGGGTAGCTA CTACATTAGC
CTGGAGGGTT ATAGGAGACA GTTCATTAGT AAACTTGGGT TTGATCCATA CCCAGGTACA
TTAAACGTGA AGCTACTTGA CCAGTACATG AAGTATAGGC TATACTTGGA GAGGGTGCCT
GGCGTGAGGA TTGAGGGCTT CAGTAATGGT TCAAGAACCT ACGGGGGTGT TAAGGCGTTT
AAATGCACCA TAAGTGACAT ACCCTGCGGT GTACTACTAA TAGAGAGGAC TTCCCACGGT
CCTGAGGTTA TTGAGATTGT GGCCCCAGTT AAATTAAGGG ATAGGCTTGG GCTTAAGGAT
GGTGACGATG TAACAATAAA TATTCTACTT TAA
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| Protein sequence | MDKQVNVVNY RELKKIPYIL LLLQNGVNDH DFTRISVSDL SKQMGTTPQN ISKVLRRLER
EGYIVRSSVK GEVSVMLSEK GSALLRNLMD LMENLLGKNI TIVLRGIVVT GFGEGSYYIS
LEGYRRQFIS KLGFDPYPGT LNVKLLDQYM KYRLYLERVP GVRIEGFSNG SRTYGGVKAF
KCTISDIPCG VLLIERTSHG PEVIEIVAPV KLRDRLGLKD GDDVTINILL
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