| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1223 |
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| Symbol | |
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| ID | 5710112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1293978 |
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| End bp | 1294700 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275727 |
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| Product | SPP-like hydrolase |
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| Protein accession | YP_001541040 |
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| Protein GI | 159041788 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01482] Sucrose-phosphate phosphatase subfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01487] sucrose-phosphate phosphatase-like hydrolase, Archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0131794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.788944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATGG GTATTAATCT ACTCCTACTC GACGTTGATG GAACATTAAC AGTGAATAGG
GGTGAACTGG CGCTTGAACC TGAGGCAATT AGAGCTATAC AGAGGGCTAG GGGTAGGGTT
AGGATTGGTT TAGTAACCGG TAATGCATTG ATTGTTGCTG AGGCTTTAGC AAAGTACATT
GGGCTTAATG ATGCACCAAT TATCGCTGAG AACGGTTGCA TAATCAAGGT TAATTCATCA
ACGATAATGC TAAGTGCGTT AAGTGCTAGG AGCATTGCTG AGGAATTAAT TAAGAGGCTT
GGATTGAAGC CCACTTACCA ATACCCCTGC AGGTACCTTG ACATGACCCT TGACGTTAAT
GGTGATGATT ATAATGTTGT AAATAGGATT AGGGAGGAGT TAATTAAAAT GAGGGTTAAT
GAATCATATG CCGTGGAAAC CAGTGGCTAC GCAGTTCACA TTAGGCCTAT TGAATGCAGT
AAAGCCACTG CAATTAGGAG GCTTTGCGAG TTAATTAATG TGGATTGCTC AACAGTAGCC
TTCATAGGTG ATAGTGATAT TGATGCCGAG GCCTTTAAGG TTGTTGGCTT AGGCGTGGCG
GTGGGTAATG CCACAGGGAG GGCTAAGGAA CACGCTAAGT TAGTGACAAG AAACCCAAGC
GGTAAGGGTG TTGCAGAGTT CATAGAATTA ATGTTAAGTG GAGGTATTAA TACATTGACT
TAA
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| Protein sequence | MGMGINLLLL DVDGTLTVNR GELALEPEAI RAIQRARGRV RIGLVTGNAL IVAEALAKYI
GLNDAPIIAE NGCIIKVNSS TIMLSALSAR SIAEELIKRL GLKPTYQYPC RYLDMTLDVN
GDDYNVVNRI REELIKMRVN ESYAVETSGY AVHIRPIECS KATAIRRLCE LINVDCSTVA
FIGDSDIDAE AFKVVGLGVA VGNATGRAKE HAKLVTRNPS GKGVAEFIEL MLSGGINTLT
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