Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1220 |
Symbol | |
ID | 5709732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1291405 |
End bp | 1292538 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275724 |
Product | succinyl-CoA synthetase, beta subunit |
Protein accession | YP_001541037 |
Protein GI | 159041785 |
COG category | [C] Energy production and conversion |
COG ID | [COG0045] Succinyl-CoA synthetase, beta subunit |
TIGRFAM ID | [TIGR01016] succinyl-CoA synthetase, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.23479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCTAC TTGAGTATAA GGGTAAGGAG ATACTGGCTA AGTATGGTGT AAGCGTGCCT AAAGGTGTTG TAATCAGTAG CGTGAGCGAC ATTGATAAGA GTAACCTAAA GTACCCAGTA TTCGTTAAGT CCCAGGTACC CTTCGCAGGT AGGGCTAAGA TGGGGCTTGT TAAGAGGGCT AATAATAAGG ATGAGGCTAA GCAAATAGCT TCAGAGTACT TGGGTAAGGT TATTCAGGAC TTTGAGGTTA AGAAGGTTCT ACTTGAGGAG GGGGTTGATG TTGTTAAGGA GTACTACGTC TCAGTAACCA TAGATAGATC CAGTAGGACA TTCATAATCC TGGCCTCACC TGAGGGTGGG GTTGATATAG AGGAGATAGC TAGGACAAGT CCTGAGAAAA TATACAGGGG TAGGATCCAT CCCTTTGAGG GTCTTAGGGA CTACACTGTT AACGCTATTA ATAAGTTCAT GGGCTTCACA GGGGAGTTAG CCTCAAAATT CGCCTCACTC CTTAGAATAA TGTACAACGT GTTTGAAACT TATGATGCTG AATTAGTGGA GATTAATCCA CTTGCCTTAA CAAGGGACGG TAACTTCGTT GCCCTTGATG TTAAAATAAT GATCGATGAC AATGCACTAT ATAGGCATGG TGATATTTCA GTGGAGGAGG AGGGTGACTT AACCAGGGAG GAGCTTGAGG CTAGGAAGTA CGGCTTCCAC TACGTTGAGT TACCGGGCTA CGTGGGTGTT GTTGGTAATG GGGCTGGTTT AACAATGGCC ACAATGGATC TTGTTAAGGA GTTTAAGGGT GAACCAGCTG ACTTCCTTGA CGTTGGGGGT GGTGCAAGTA GGGATATTGT TAAGGCAGCC TTAAGCCTAC TACTTAAGGA TGAGAGGATT AAGGGAATCG TATTAAATAT CTTCGGTGGA ATAACCAGGG GAGATGAGGT TGCCTACGGT GTCGTGGAGG CCTTTAAGGA GATTGGCGCC TCTAAGCCAT TGGCAATAAG GCTGAAGGGA ACCAATGAGG AGGAGGGTAG GAGGATTCTA GCCCCATTGG GGGTTAAAAT TTATGAAACA GCCGAGGAGG CTATAGGTGA ATTAATGAGT AAACTACAGG GTGGTTCAAG ATGA
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Protein sequence | MRLLEYKGKE ILAKYGVSVP KGVVISSVSD IDKSNLKYPV FVKSQVPFAG RAKMGLVKRA NNKDEAKQIA SEYLGKVIQD FEVKKVLLEE GVDVVKEYYV SVTIDRSSRT FIILASPEGG VDIEEIARTS PEKIYRGRIH PFEGLRDYTV NAINKFMGFT GELASKFASL LRIMYNVFET YDAELVEINP LALTRDGNFV ALDVKIMIDD NALYRHGDIS VEEEGDLTRE ELEARKYGFH YVELPGYVGV VGNGAGLTMA TMDLVKEFKG EPADFLDVGG GASRDIVKAA LSLLLKDERI KGIVLNIFGG ITRGDEVAYG VVEAFKEIGA SKPLAIRLKG TNEEEGRRIL APLGVKIYET AEEAIGELMS KLQGGSR
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