Gene Cmaq_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1220 
Symbol 
ID5709732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1291405 
End bp1292538 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content45% 
IMG OID641275724 
Productsuccinyl-CoA synthetase, beta subunit 
Protein accessionYP_001541037 
Protein GI159041785 
COG category[C] Energy production and conversion 
COG ID[COG0045] Succinyl-CoA synthetase, beta subunit 
TIGRFAM ID[TIGR01016] succinyl-CoA synthetase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.23479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCTAC TTGAGTATAA GGGTAAGGAG ATACTGGCTA AGTATGGTGT AAGCGTGCCT 
AAAGGTGTTG TAATCAGTAG CGTGAGCGAC ATTGATAAGA GTAACCTAAA GTACCCAGTA
TTCGTTAAGT CCCAGGTACC CTTCGCAGGT AGGGCTAAGA TGGGGCTTGT TAAGAGGGCT
AATAATAAGG ATGAGGCTAA GCAAATAGCT TCAGAGTACT TGGGTAAGGT TATTCAGGAC
TTTGAGGTTA AGAAGGTTCT ACTTGAGGAG GGGGTTGATG TTGTTAAGGA GTACTACGTC
TCAGTAACCA TAGATAGATC CAGTAGGACA TTCATAATCC TGGCCTCACC TGAGGGTGGG
GTTGATATAG AGGAGATAGC TAGGACAAGT CCTGAGAAAA TATACAGGGG TAGGATCCAT
CCCTTTGAGG GTCTTAGGGA CTACACTGTT AACGCTATTA ATAAGTTCAT GGGCTTCACA
GGGGAGTTAG CCTCAAAATT CGCCTCACTC CTTAGAATAA TGTACAACGT GTTTGAAACT
TATGATGCTG AATTAGTGGA GATTAATCCA CTTGCCTTAA CAAGGGACGG TAACTTCGTT
GCCCTTGATG TTAAAATAAT GATCGATGAC AATGCACTAT ATAGGCATGG TGATATTTCA
GTGGAGGAGG AGGGTGACTT AACCAGGGAG GAGCTTGAGG CTAGGAAGTA CGGCTTCCAC
TACGTTGAGT TACCGGGCTA CGTGGGTGTT GTTGGTAATG GGGCTGGTTT AACAATGGCC
ACAATGGATC TTGTTAAGGA GTTTAAGGGT GAACCAGCTG ACTTCCTTGA CGTTGGGGGT
GGTGCAAGTA GGGATATTGT TAAGGCAGCC TTAAGCCTAC TACTTAAGGA TGAGAGGATT
AAGGGAATCG TATTAAATAT CTTCGGTGGA ATAACCAGGG GAGATGAGGT TGCCTACGGT
GTCGTGGAGG CCTTTAAGGA GATTGGCGCC TCTAAGCCAT TGGCAATAAG GCTGAAGGGA
ACCAATGAGG AGGAGGGTAG GAGGATTCTA GCCCCATTGG GGGTTAAAAT TTATGAAACA
GCCGAGGAGG CTATAGGTGA ATTAATGAGT AAACTACAGG GTGGTTCAAG ATGA
 
Protein sequence
MRLLEYKGKE ILAKYGVSVP KGVVISSVSD IDKSNLKYPV FVKSQVPFAG RAKMGLVKRA 
NNKDEAKQIA SEYLGKVIQD FEVKKVLLEE GVDVVKEYYV SVTIDRSSRT FIILASPEGG
VDIEEIARTS PEKIYRGRIH PFEGLRDYTV NAINKFMGFT GELASKFASL LRIMYNVFET
YDAELVEINP LALTRDGNFV ALDVKIMIDD NALYRHGDIS VEEEGDLTRE ELEARKYGFH
YVELPGYVGV VGNGAGLTMA TMDLVKEFKG EPADFLDVGG GASRDIVKAA LSLLLKDERI
KGIVLNIFGG ITRGDEVAYG VVEAFKEIGA SKPLAIRLKG TNEEEGRRIL APLGVKIYET
AEEAIGELMS KLQGGSR