| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1211 |
|---|
| Symbol | |
|---|
| ID | 5709129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1276451 |
|---|
| End bp | 1277206 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641275715 |
|---|
| Product | ABC-2 type transporter |
|---|
| Protein accession | YP_001541028 |
|---|
| Protein GI | 159041776 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.0428455 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTC AGGAGATTTG GATTCAGATT AGGTCAGTAT TAGTCTTCGC CTGGTTCTAC
GGATGGTTAG CTGTTGTTAG GGAGCCGTTC TGGTTAGTCT CCTCCCTACT GAGTCCATTA
TCCATTGTAA TAATAATGAC GATATTCGGT GGGGTACATT ACATGAGCTT TGGACTACTG
GGTGGATTAG CCATGGCTGT TAGCTCAAGT GGCGGATTCA CAATAATAGG TGACGCCACT
TACCTGAGGC TTGAGTTAAA GTACCAGTCA ATGCTAATAA ACACTAGGCT TAACCCAATA
TCCTACACCC TTGGTTTAGC CCTATCTGAA TTAACCTACG CCCTACCAGG CCTAGCGGTA
TTCATTATAC TGATGCAATT AATCATGCAT ATACCCGCAT CCCTATACCT CCTAGTAATC
CCAATACTGG CCCTTGAGTG GGTTGCGGCA AGCATGCTTG GCTTCACCTT ATCCACGTTA
ATGAATGATG TTAGGTACGG TTGGTCCCTA TCAGGCATAT TAGGCTTCCT ACTGGGTACA
CTACCCCCAG TCTTCTACCC AGCCTACCTA CTACCCACAC CATACATCGC CCTAGTATCC
CCAGTCAGCA TAGTATCCAC GGTGCTTCAG TACATTATAC TAAGGGTTAA TTACCCACAG
ATGCTAATTA GGTTAAGCGT AATCCTACTG TTAGCCGAGA CCGTGGTTTT CACAATACTT
GCATTACGTA AATCCAGGTG GAGGAGCGTT TACTGA
|
|---|
| Protein sequence | MNLQEIWIQI RSVLVFAWFY GWLAVVREPF WLVSSLLSPL SIVIIMTIFG GVHYMSFGLL
GGLAMAVSSS GGFTIIGDAT YLRLELKYQS MLINTRLNPI SYTLGLALSE LTYALPGLAV
FIILMQLIMH IPASLYLLVI PILALEWVAA SMLGFTLSTL MNDVRYGWSL SGILGFLLGT
LPPVFYPAYL LPTPYIALVS PVSIVSTVLQ YIILRVNYPQ MLIRLSVILL LAETVVFTIL
ALRKSRWRSV Y
|
|---|
| |