| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1206 |
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| Symbol | |
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| ID | 5709275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1272098 |
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| End bp | 1272682 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275710 |
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| Product | transcription factor |
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| Protein accession | YP_001541023 |
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| Protein GI | 159041771 |
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| COG category | [K] Transcription |
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| COG ID | [COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.693601 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.00093313 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCGAAGG AACCTGTATA CAGGATTGAG AACATAGTGG CCACAGTGAA CCTGGGTGTT
GACCTAGATC TAGAGAGGCT TGCGGAAGTC CTACCTGCGG CAGAGTATAA CCCGGATCAA
TTCCCCGGCT TAATACTTAG GTTCCAGAGG CCTAAGATAT CGGCCTTAAT ATTCAGGACG
GGTAAAATGG TTTGCACAGG GGCTAAGAGT GAGGATGAGT TGAAGAGGGC TGTTAAGTAC
CTTGTTAAGA CCCTCAACCA GCGTGGTGCA CAGATTCAGA ATGATTCAGA TATTCAGGTT
CAGAACATTG TTGCCTCAGG TAATTTACAC GCTGAGGTTA ATATTGAGAA GGCTGCGTTA
CTACTTGAGA ACTCAATGTA TGAGCCTGAG CAGTTCCCAG GATTAATATA TAGGATGAGT
GACCCTAAGG TAGTCATATT AGTGTTCAGT TCAGGTAAGA TAGTTTGCAC GGGAGCTAAG
AAGGAGGCTG ATGTAGCTGT GGCTGTACGT AAGCTTTACG ATAAGTTAAA GGAGATTAAC
GCCCTCTATG TTATTGAGGA GGAATCAGCA TATGAGGAAA CGTAA
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| Protein sequence | MPKEPVYRIE NIVATVNLGV DLDLERLAEV LPAAEYNPDQ FPGLILRFQR PKISALIFRT
GKMVCTGAKS EDELKRAVKY LVKTLNQRGA QIQNDSDIQV QNIVASGNLH AEVNIEKAAL
LLENSMYEPE QFPGLIYRMS DPKVVILVFS SGKIVCTGAK KEADVAVAVR KLYDKLKEIN
ALYVIEEESA YEET
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