Gene Cmaq_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1192 
Symbol 
ID5710174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1252687 
End bp1253916 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content43% 
IMG OID641275694 
Producthypothetical protein 
Protein accessionYP_001541009 
Protein GI159041757 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.288324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0000771077 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCCGC AGTTAATAAT ACTGGTATTA TTAGTAATAA TGGTACTGGC ACCATCGGCA 
TTAGCCCTAA ACGCAGTGGG TGTGTCGGAT AATGGGACAG CTGAGCTTTG GAATGGATCG
ATAATACACT ACTCATACCA CGTTAATGCA GTGATGGGTT ACTTAACGCT TTACAACGCG
TCATTCACCA TAATAAGCCT AGCCGCCTCA GGTAATGTTG CAAGTATTCA ATTAAACCTA
GTGGTAACAA ATGGCATAGA GTACTTCTGG GTTCAGAATA TTGCGCATAT TGGGGAATTT
AATGGATCCA GGTACATGGT TTGGTTTTGG GACGACTTAT GGAACATAAC TAGGGTTAAT
GCACTACTGG ATCTCTCATT GATTAAGGGT AATAGAACAT ACCCAGTCAC AGAGCATTAC
GCATACTACT ACAGGTATGT GGCTCCCCCA GTAATGCTGG TTAAGGCGCC GTTCACGGTA
TCATGCATGG TTACGGTTAA TTTAACCCAC GGCTACATTA ACGTGAATTA CTGGTATAGG
TTAAACAATA CGAGGCTTGA TACCGGGTGG GTTAAGTACG ATGACGTGTT GATTAAGGTT
AATTCAACGA GGGCCTACAT AATCATCGGT GGATTTAACC CAGGTAACTT AAGTAATGAC
ATTGAGTGGG TTACCGCAGG CTACACTGCG GCTGCTCAAT TATACGTGTT TAAGTGGAAT
GCATCAATGA TACTAATGTA TAGGTACAAT GGATCATGGT TCACACCCCC AGGTGGCCAA
TCCAGGTCCT TCGACACAGG TGAGTCAGTT AACCCAATTG CCGGAATAAG TGAGAGTTAC
ATTAACGGTA TTGTGCATCA GGAGTACGGT AGAGTGAACT CAACCTACCT ATGGTTAATT
AACGCATCAG TGAACTTAAG GCGTAATGAA TTAATAATAC GTGTAACGCC AAGTGGGGCT
AGGTGGATTG CGGTAATTAA TGGTAAGGCC ATGTTATTGA ATTCAAGTGA AACCATTATC
AACACCGGGA ACTGGGCTAG CGGTAGGTAT AAGTTAACGT TAACATTATA TGCAGGTGAC
GTTGGGATTT ATGAATACGC CTATGAATTC ACGATTAAGG GCGTGGGCGT ATGGCTTTGG
TTAATCCCCC TAGTAATAGT GTTACTAATA ATTGCAATTT ACCGTGGAAT TCTTAAATAC
GGCGCCAGGG CTTTAAGGCG TTATGTATGA
 
Protein sequence
MKPQLIILVL LVIMVLAPSA LALNAVGVSD NGTAELWNGS IIHYSYHVNA VMGYLTLYNA 
SFTIISLAAS GNVASIQLNL VVTNGIEYFW VQNIAHIGEF NGSRYMVWFW DDLWNITRVN
ALLDLSLIKG NRTYPVTEHY AYYYRYVAPP VMLVKAPFTV SCMVTVNLTH GYINVNYWYR
LNNTRLDTGW VKYDDVLIKV NSTRAYIIIG GFNPGNLSND IEWVTAGYTA AAQLYVFKWN
ASMILMYRYN GSWFTPPGGQ SRSFDTGESV NPIAGISESY INGIVHQEYG RVNSTYLWLI
NASVNLRRNE LIIRVTPSGA RWIAVINGKA MLLNSSETII NTGNWASGRY KLTLTLYAGD
VGIYEYAYEF TIKGVGVWLW LIPLVIVLLI IAIYRGILKY GARALRRYV