Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1192 |
Symbol | |
ID | 5710174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1252687 |
End bp | 1253916 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275694 |
Product | hypothetical protein |
Protein accession | YP_001541009 |
Protein GI | 159041757 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.288324 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0000771077 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGCCGC AGTTAATAAT ACTGGTATTA TTAGTAATAA TGGTACTGGC ACCATCGGCA TTAGCCCTAA ACGCAGTGGG TGTGTCGGAT AATGGGACAG CTGAGCTTTG GAATGGATCG ATAATACACT ACTCATACCA CGTTAATGCA GTGATGGGTT ACTTAACGCT TTACAACGCG TCATTCACCA TAATAAGCCT AGCCGCCTCA GGTAATGTTG CAAGTATTCA ATTAAACCTA GTGGTAACAA ATGGCATAGA GTACTTCTGG GTTCAGAATA TTGCGCATAT TGGGGAATTT AATGGATCCA GGTACATGGT TTGGTTTTGG GACGACTTAT GGAACATAAC TAGGGTTAAT GCACTACTGG ATCTCTCATT GATTAAGGGT AATAGAACAT ACCCAGTCAC AGAGCATTAC GCATACTACT ACAGGTATGT GGCTCCCCCA GTAATGCTGG TTAAGGCGCC GTTCACGGTA TCATGCATGG TTACGGTTAA TTTAACCCAC GGCTACATTA ACGTGAATTA CTGGTATAGG TTAAACAATA CGAGGCTTGA TACCGGGTGG GTTAAGTACG ATGACGTGTT GATTAAGGTT AATTCAACGA GGGCCTACAT AATCATCGGT GGATTTAACC CAGGTAACTT AAGTAATGAC ATTGAGTGGG TTACCGCAGG CTACACTGCG GCTGCTCAAT TATACGTGTT TAAGTGGAAT GCATCAATGA TACTAATGTA TAGGTACAAT GGATCATGGT TCACACCCCC AGGTGGCCAA TCCAGGTCCT TCGACACAGG TGAGTCAGTT AACCCAATTG CCGGAATAAG TGAGAGTTAC ATTAACGGTA TTGTGCATCA GGAGTACGGT AGAGTGAACT CAACCTACCT ATGGTTAATT AACGCATCAG TGAACTTAAG GCGTAATGAA TTAATAATAC GTGTAACGCC AAGTGGGGCT AGGTGGATTG CGGTAATTAA TGGTAAGGCC ATGTTATTGA ATTCAAGTGA AACCATTATC AACACCGGGA ACTGGGCTAG CGGTAGGTAT AAGTTAACGT TAACATTATA TGCAGGTGAC GTTGGGATTT ATGAATACGC CTATGAATTC ACGATTAAGG GCGTGGGCGT ATGGCTTTGG TTAATCCCCC TAGTAATAGT GTTACTAATA ATTGCAATTT ACCGTGGAAT TCTTAAATAC GGCGCCAGGG CTTTAAGGCG TTATGTATGA
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Protein sequence | MKPQLIILVL LVIMVLAPSA LALNAVGVSD NGTAELWNGS IIHYSYHVNA VMGYLTLYNA SFTIISLAAS GNVASIQLNL VVTNGIEYFW VQNIAHIGEF NGSRYMVWFW DDLWNITRVN ALLDLSLIKG NRTYPVTEHY AYYYRYVAPP VMLVKAPFTV SCMVTVNLTH GYINVNYWYR LNNTRLDTGW VKYDDVLIKV NSTRAYIIIG GFNPGNLSND IEWVTAGYTA AAQLYVFKWN ASMILMYRYN GSWFTPPGGQ SRSFDTGESV NPIAGISESY INGIVHQEYG RVNSTYLWLI NASVNLRRNE LIIRVTPSGA RWIAVINGKA MLLNSSETII NTGNWASGRY KLTLTLYAGD VGIYEYAYEF TIKGVGVWLW LIPLVIVLLI IAIYRGILKY GARALRRYV
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