| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1176 |
|---|
| Symbol | |
|---|
| ID | 5709369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1234632 |
|---|
| End bp | 1235417 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275677 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001540993 |
|---|
| Protein GI | 159041741 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.850669 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.305287 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTAACA TGATTAGGAG GTTCTGGTTA GCTAAGGTCG GGGATCATGG GGAGGTCCCT
GGACCGGAGG TGTATTGGAT GAGGGATTTC GATAAGTGGG TTAGGTTAAG CTTCTACACA
ATGATAATTG ATACTGATGA CGGCTACGTC CTAGTGGGCA CTGGTTTAGT TAGGGATTTA
ACCCTTAGGA ATAAGTTCCT AAGGGAGTGG GCTGGTAGTG ATAGGTGTAG GTTCACTGTT
CAGGATAATG AGAGGATTGA GAACATATTA AAGAGACTTA AGTTAACGCC TGATGATATT
GCACACATCA TAATAACCCC GGTGCAGGAC TACACGGTCG GTGGCTTGGA CTTGTTTAAG
AAGGCTAAAA TATACTTCTC AAGGAGGGGT TGGTTTGAGG ATGTTGTTAA CCCTAAGCCA
TCCCCATTCC TAAACAGGGA CGTTTACCTA CCTAAGTATG TTAGGGATTA CTTATTTGAG
GAGGCTTGGG GTAGGATAAT GCTTCTTGAT GATGAGGATG AGGTTGTTGA TGGTGTTAGG
GTTAAGTGGA CTGGTTGCCA TCACAGGAGC TCAATGGCAG TAATAATTAA CACTAAGGAT
TACGTGGTTA GTTTAACGGA CTCAGCCTTC ACCCTTAGGA ACATTAGGGA GAACATACCC
ATAGGTATAG CTGAGGATAT TTACGAGTGC CTAAACGCCT ACGAGTACCT GAGGGCTAGG
AGTAAGGTAA TTATACCAGC CTACGACCCA GATAACGTTA ACACCTTCAG GGAATGGTTC
ATTTAA
|
|---|
| Protein sequence | MVNMIRRFWL AKVGDHGEVP GPEVYWMRDF DKWVRLSFYT MIIDTDDGYV LVGTGLVRDL
TLRNKFLREW AGSDRCRFTV QDNERIENIL KRLKLTPDDI AHIIITPVQD YTVGGLDLFK
KAKIYFSRRG WFEDVVNPKP SPFLNRDVYL PKYVRDYLFE EAWGRIMLLD DEDEVVDGVR
VKWTGCHHRS SMAVIINTKD YVVSLTDSAF TLRNIRENIP IGIAEDIYEC LNAYEYLRAR
SKVIIPAYDP DNVNTFREWF I
|
|---|
| |