Gene Cmaq_1173 details

Gene Information

• Locus tag: Cmaq_1173
• Symbol: leuD
• ID: 5709366
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Caldivirga maquilingensis IC-167
• Kingdom: Archaea
• Replicon accession: NC_009954
• Strand: +
• Start bp: 1231944
• End bp: 1232471
• Gene Length: 528 bp
• Protein Length: 175 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641275674
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_001540990
• Protein GI: 159041738
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 0.595401
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTAAAT TAACCGGGTT AACTATGCCT CAACTAGTAG TGGAGGGTAG GGTCATTAAG 
GTTGGGGATA ACATTGATAC TGATGTAATA ATCCCAGCCA AGTACCTGGT TTACACTGAT 
CCATCAATAC TGGGTAAGCA CGCCATGGAG CCCCTTGACC CCAACTTCTA TGAGAAGGCT 
AAGAATGGTG TAATACTTGT TGGTGGAAGA GCCTTCGGAA TGGGTTCAAG TAGGGAACAA 
GCCGCAATAG CGCTTAAGGC CGCTGGGGTT AAGGCTGTAT TAGCGGAGTA CTTCGCTAGG 
ATATTCTACA GGAATGCAAT AAACAATGGG CTCCCAGTCT TAACTGTACC GGGTGTAAGT 
AAGATGATTA ATGATGGTGA CCACGTACGT GTCATAGTTG ATACAGGTGA AATTATTATA 
AATGATTCAA GGGTTATTAA GGCTAAGCCA ATAACGGGAG TAGCCCTTGA AATACTACTT 
AAGGGCGGAT TACTGAATTA CCTAAAGAGT AGTGGCCAGT CTAAGTGA 

 

Protein sequence

MSKLTGLTMP QLVVEGRVIK VGDNIDTDVI IPAKYLVYTD PSILGKHAME PLDPNFYEKA 
KNGVILVGGR AFGMGSSREQ AAIALKAAGV KAVLAEYFAR IFYRNAINNG LPVLTVPGVS 
KMINDGDHVR VIVDTGEIII NDSRVIKAKP ITGVALEILL KGGLLNYLKS SGQSK