| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1171 |
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| Symbol | |
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| ID | 5709434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1229574 |
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| End bp | 1230758 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275672 |
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| Product | isopropylmalate/citramalate/homocitrate synthase |
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| Protein accession | YP_001540988 |
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| Protein GI | 159041736 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02090] isopropylmalate/citramalate/homocitrate synthases |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.653479 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGTCTGGA TTGCTCAAGA AATGATTCAA TCCCCCGTTA AGGAGACGGG GGTTAGGTAT
GTGAGGTTCC TAGACACCAC CCTAAGGGAT GGTGAACAAA CACCAGGGGT TGCATTAAGA
CCTGAGGAGA AGTTGATAAT AGCAATGAAG CTTGAGGACC TTGGGGTTGA TTCAATAGAG
GCCGGTTACC CATCCGTGAG TGAGGGTGAG TTTAAGTCTG TTAAAATGAT TAGTAAGGAG
ATTACTGAAT CTGAGGTTAT TGCATTATCA AGGTCTAATA AGGCTGATAT TGATAAGGCT
ATTGACGCTG ACGTAAAGGC GGTTCACTTA TTCATAGCCA CGTCTGATAT ACACATGAAG
TATAAGTTAA GGATGAGTAG GAGCCAGGTA ATTGAAACAG CGGTTAACGC CGTTGAGTAC
GCTAAGAGCC ACGGCTTAAC AGTGGAGTTC AGCGCCGAGG ATGCAACTAG AAGTGACTTA
GACTTCCTAA TCAATGTGTT TCAAAGCGTG GTGAACGCTG GGGCCGATAG GCTTGACATA
GCTGATACTG TTGGGGTTAT GTGGCCCAGT AGGATTATGA ACCTGGTTAA GGTGATTAAA
AGCAATGTGA AGGGTAATTA CCTACTCAGT GTTCACTGTC ATGATGACTT CGGGATGGCT
GTAGCCAATA GTGTAGCCGC GATAGAGGCT GGGGCTGATC AAGCTCATGG TACAATAAAC
GGTGTTGGGG AGAGAGCCGG TAATGCGGCA TTGGAGGAGA TAGCCTCAGC TGTTAAATTC
CTACTGGGTT ATGATACTAG GATTAGGTTC AATAAGATTA AGGATGTTTC AGACACAGTG
TCAAGGTTCT TTAAGATACC TGTACCACCC AATAAGGCTA TAGTCGGTGC TAATGCCTTC
TCCCATGAGT CGGGCATACA CGTGCACGGT ATCTTAAGTA ACCCCCAGAC GTATGAACCC
ATTGACCCCA CTATGGTTGG TATGAGTCGT AGAATAGTCC TAGGTAAGCA TAGTGGTAGG
CATTCAGTGG AGTATGCCTT AAAGATGATG GGTATTGAAC CCAGTAATGA ACTAGTCATG
AGGATACTCC ACCGCATAAA GCAACTGGGT GACTCAGGGA GTAGCTTAAC ATGGGAGGAC
TTTAAAAGGA TAGTACTAAT GGAGATTAAC AGTGAGTCAG CATGA
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| Protein sequence | MVWIAQEMIQ SPVKETGVRY VRFLDTTLRD GEQTPGVALR PEEKLIIAMK LEDLGVDSIE
AGYPSVSEGE FKSVKMISKE ITESEVIALS RSNKADIDKA IDADVKAVHL FIATSDIHMK
YKLRMSRSQV IETAVNAVEY AKSHGLTVEF SAEDATRSDL DFLINVFQSV VNAGADRLDI
ADTVGVMWPS RIMNLVKVIK SNVKGNYLLS VHCHDDFGMA VANSVAAIEA GADQAHGTIN
GVGERAGNAA LEEIASAVKF LLGYDTRIRF NKIKDVSDTV SRFFKIPVPP NKAIVGANAF
SHESGIHVHG ILSNPQTYEP IDPTMVGMSR RIVLGKHSGR HSVEYALKMM GIEPSNELVM
RILHRIKQLG DSGSSLTWED FKRIVLMEIN SESA
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