Gene Cmaq_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1162 
Symbol 
ID5709620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1219405 
End bp1220592 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content49% 
IMG OID641275662 
Productmajor facilitator transporter 
Protein accessionYP_001540979 
Protein GI159041727 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAATGG GCACTAAGTG GAATGAGGTT TGGAAAATAT CCTTCTCAGC ATTCTTTGCT 
GATCTGGGGT ACCAGGTAGC CGTCGTCGTG TTTCCCTTGA TCTTCGTGCT ATACCTGGGT
GCGCCCATTT GGCTTTACGG TGTTGCTGAG GCTATTAATT ACGGGTTAGG CGCCTTCCTG
GGGTTCCTAG GTGGGTTGGT GAGTGATGTG GTGGGTAGGA AGAGGGTTGC CTTAGTGGGT
AATGCGGTAA TACTAGTGTT GACGCTCCTA GGGTTCTCGA GGTATTGGTG GCAGGCCCTG
GTGATATTCA TGATTGGGTG GTGGGCAAGA AACTTTAGGA CACCACCCAG GAGGGCTATG
CTCACTGAGG TCACGCAGCC CAGTGATAGG AGCCATGCCT TTGGTATACT GCATGCCTTG
GATATAACAG GAGCCGTGTT AGCCATAACA TACACTGCAG TCCTGCTATT CATTAAATTT
CCCATAGAGT ACCTACTGGC CATAACCGCC ATACCCCTCA CGGCATCCAC ATTACTGCTC
TCCCTAGTTA ATGTGAGCGG GGCCAGGGTA AATGGCGTGA GGGGCACGTT TACTTCATTT
AGAACTAGGT CAAGCACAAA CCTATGGTTC ATAGTGGTGT CCACATTCCT CTTCGGATTC
AGCCAGTATA GTTTCGGGTT CCCCATAATA ACCACTATGC AATTCACCCA CGAGGATTAC
CTGGCCGTGG TAACGTATGG GGTATTCCTA ACGGCCTCGG CAATCTTCGG TTATTTATTC
GGAAAACTAA GGCTAAGTGA GTACAGGGGG TTGGCCTTCC TGGGCTACCT AATGGGCTCG
GTGGCATCCC TGGGTTTCGC ACTACTTGCA CCACTGGGTA TCCTGGGCAC GTATCCAATG
GCGTTCTTAC TAGGTATTGC TGTGGCGGGT ACCGAGGTCT TCGAACCAAC AATAGTCTCT
AGGCTCGTGC CAGAGGAGTC CCTGGGCTCA GGTATGGGTA TGCTAACCCT GGGCAGGAGT
ATTGGTTTAC TTCTTGGGAA TTCAGTAATG GGGCTGTTAT ACCAAATACA CTACACATAC
TCATACTACT TCGCATCAGC AACATCCTTC GCAGCCTTCA TAATAATCAT GCTAATACAG
AGAACCATGA AACTAGGACT AATCAAGGGA CTCAACCATA ATCATTAA
 
Protein sequence
MAMGTKWNEV WKISFSAFFA DLGYQVAVVV FPLIFVLYLG APIWLYGVAE AINYGLGAFL 
GFLGGLVSDV VGRKRVALVG NAVILVLTLL GFSRYWWQAL VIFMIGWWAR NFRTPPRRAM
LTEVTQPSDR SHAFGILHAL DITGAVLAIT YTAVLLFIKF PIEYLLAITA IPLTASTLLL
SLVNVSGARV NGVRGTFTSF RTRSSTNLWF IVVSTFLFGF SQYSFGFPII TTMQFTHEDY
LAVVTYGVFL TASAIFGYLF GKLRLSEYRG LAFLGYLMGS VASLGFALLA PLGILGTYPM
AFLLGIAVAG TEVFEPTIVS RLVPEESLGS GMGMLTLGRS IGLLLGNSVM GLLYQIHYTY
SYYFASATSF AAFIIIMLIQ RTMKLGLIKG LNHNH