| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1149 |
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| Symbol | |
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| ID | 5709037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1204591 |
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| End bp | 1205322 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641275648 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001540966 |
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| Protein GI | 159041714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1709] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.475219 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGGAAA CCATTGAGAA TACCATGGTG GATAAGGTTG CCACCTTAAT AGCCGGGTCA
ATAGTTATGG CTGATTCACC GGGTAAGGAG CTTAAACGCT GGAGGGAGTA CTTCAACATA
CCTCAAACTG AGTTGGCCAT AAAGTTATCA ACGACACCAA GTGTGATCAG TGACTATGAG
TCAGGTAGGA GGAAGTCCCC TGGATCATAC TTCATTAAGA AGTTTGTTAA AGCCTTAATA
GATATTGAAC TGGAGAAGGG TGGTTCAAGG CTTCAACTAC TCATTAAGCA ATTATCAATT
GGTGATAAGT ATACCTTAGC TGTGGTTGAT ATGAAGGATT ACGTTAACCC AATAAGCCTC
GAAACATTCC TAAAGGCGAT AAACGCATCC CTAGTAGTGC CCCCAGCCAC GAGAATGGAT
ATTCACGGAT ACACCATGGT TGATAGCATT AAGCTACTGC TTGATGTCCC ATCATACGAG
TACCTTAAGC TATATGGTTC AACAACCCAG AGGGCTGCCA TATTCATTAA CACTAGGTAC
GGTAGGTCAC CTTTAGTAGC CATAAAGGCG ATGATGGCGT TCGTCGACTT TAAACCATCA
ATAGTTGTTC TACATGGCTT AGATAAACCG GATTACCTAG GTATTGAAGT GGCTAGGAGG
GAGAAGATAC CTTTAGCCAT GAGTAACATG GATGTTGATG AAATGGTTAG GGTACTTAGA
TCACTTGGTT AA
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| Protein sequence | MEETIENTMV DKVATLIAGS IVMADSPGKE LKRWREYFNI PQTELAIKLS TTPSVISDYE
SGRRKSPGSY FIKKFVKALI DIELEKGGSR LQLLIKQLSI GDKYTLAVVD MKDYVNPISL
ETFLKAINAS LVVPPATRMD IHGYTMVDSI KLLLDVPSYE YLKLYGSTTQ RAAIFINTRY
GRSPLVAIKA MMAFVDFKPS IVVLHGLDKP DYLGIEVARR EKIPLAMSNM DVDEMVRVLR
SLG
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