Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1140 |
Symbol | |
ID | 5710190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1196809 |
End bp | 1197984 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641275639 |
Product | D-galactarate dehydratase/Altronate hydrolase domain-containing protein |
Protein accession | YP_001540957 |
Protein GI | 159041705 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2721] Altronate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.944509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGATG TGGCTGGCAA ATACCCAACC ATTAAGGCGT ACATTAGGCC TGATGGAAGC GTAGGGGTAA GGAACCACGT AGCCATAATA CCCATTGATG ACTTATCAAA CACAGCCGCC TTAGGTGTGG CTAAGTTAAT TAGGGGTACT GTGGCTATAC CGCACCCATA CGGTAGATTA CAGTTCGGTA GGGACTTGAA TCTACTATTC CATGTATTAT CCGGCACTGG GGCTAATCCC AATGTATACG GCGCCATAGT TATTGGTATT GAGGATAATT GGGCTAATAA GGTTGCTGAT GTGATAGCTA AGACGGGTAA GCCGGTTTAC GTATTCAGTA TTGAGGGTAA TGGTGATTTA AAAACCATTG AGGCAGCGGC TAGGAAGGCT AAGGAGCTTG TTCAGGATGC TGGTGAGCAG CAGAGAACTG AGGTTGATTT AACAGGCATA GTGTTCAGTA TAAAGTGCGG TGAATCAGAC ACCACATCAG GCTTAGCATC AAACCCAGCA TTAGGGCATA CTGTGGATAA GTTGGTGGAT TTAGGGAATA CGGTAATGTT TGGTGAAACC TCAGAGCTAA CGGGGGCTGA GGATATTGTA GCCAGTCGCA TAAAGGATCC TGAGTTAAGG AGTAAATTCA TGAGGATTTA CAACGAGTAC GTTGAGGTAA TTGAAAGGGA AGGCGTTGAC CTACTTGGTT CACAGCCAAC TGAAGGCAAT ATTAAAGGCG GTTTATCAAC AATAGAGGAG AAGGCACTAG GCAACATTCA GAAATTAGGC ACTAGGCCAA TTACGTGTGT TGCCGATTAC CTGGACCCAG TACCAAGGAA CGGGGGCTTA TGCTTCGTTA ACACTTCATC AGCAGCCGCG GAGGCTGTGA CGTTATTCGC CGCTAAGGGC TCTGTGCTTC ACTTCTTCAC CACAGGTCAA GGTAACGTGG TGGGTCATCC AATAATACCT GTTATCAAGA TTTCAGCCAA CCCAAAGACC GTTAAGGCAA TGGGTGAGCA CATTGACGTT GATGTATCAG ACCTACTGGA GCTTAAGGTT AGCCTACAGG AGGCTGGGGA TAGGATCTTC AACTACGCGT TAAGGGTAAT GAATGGTAGA TTAACCGCAG CTGAGGCGCT TCAGCATGAT GAATTCTCAC CCATTAAACT ATACGTGAGT GCGTGA
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Protein sequence | MSDVAGKYPT IKAYIRPDGS VGVRNHVAII PIDDLSNTAA LGVAKLIRGT VAIPHPYGRL QFGRDLNLLF HVLSGTGANP NVYGAIVIGI EDNWANKVAD VIAKTGKPVY VFSIEGNGDL KTIEAAARKA KELVQDAGEQ QRTEVDLTGI VFSIKCGESD TTSGLASNPA LGHTVDKLVD LGNTVMFGET SELTGAEDIV ASRIKDPELR SKFMRIYNEY VEVIEREGVD LLGSQPTEGN IKGGLSTIEE KALGNIQKLG TRPITCVADY LDPVPRNGGL CFVNTSSAAA EAVTLFAAKG SVLHFFTTGQ GNVVGHPIIP VIKISANPKT VKAMGEHIDV DVSDLLELKV SLQEAGDRIF NYALRVMNGR LTAAEALQHD EFSPIKLYVS A
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