Gene Cmaq_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1135 
Symbol 
ID5708889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1192073 
End bp1192405 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content44% 
IMG OID641275634 
Producthypothetical protein 
Protein accessionYP_001540952 
Protein GI159041700 
COG category[S] Function unknown 
COG ID[COG1416] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.401796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA GGGTTGTTGC ACAGGTATCG GATTTGGATA AGGTTAAGGC GGCGTTGGTG 
TCCTGCAGGA ACCTGCTTGA GGATTTAGGT AACGTGCAGC TTGAGGTTGT TTTCAATCAA
ATGGCAGTTA GGGCATTAGT CAAGGGTAGT GAGTATGAGG GTGATGTTGA TGAGCTTATT
AAAATGGGTG TTCTTATTGT TGCCTGTAGG AATGCCATGA GGTTGAATAA TATTAATGAG
GGGGATTTAA TTAACGGTGT CGCCATTGTT AATGCTGGGG TGGGGGAAAT TGTGAGGAAG
ATGGCTGATG GTTGGCTATA CTTAAGGCTG TGA
 
Protein sequence
MNYRVVAQVS DLDKVKAALV SCRNLLEDLG NVQLEVVFNQ MAVRALVKGS EYEGDVDELI 
KMGVLIVACR NAMRLNNINE GDLINGVAIV NAGVGEIVRK MADGWLYLRL