Gene Cmaq_1130 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1130 
Symbol 
ID5709499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1187584 
End bp1188024 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content40% 
IMG OID641275630 
ProductFHA domain-containing protein 
Protein accessionYP_001540948 
Protein GI159041696 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.322041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.523828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACTG GATTAGATGC CGCGATGCAT AATAATAAGG GTAATGCCAC CCTTAACGTT 
AAGGATCTAG GAGCAGAAAC AACCAGCCGT GTTGAGCAGA AGCCGGTGAA AAGGATTAGA
ATAACCTTCA TAGAATCAAC CACTGACTCA CTTAAGAACA CAGCTGTGGA TCTTGACGTA
GTGTACTTCG ATTCAATAAC CATAGGAAGG GCACCGGACA ACATAGTGGT TATACCTGAT
ATAACGGTTT CAAGGAGGCA TGCAGTAATA TCCAGGGACT CCAGTGGTTC AATAGTTCTA
GTTGACTTAA ACAGTAAGAA TGGTACATAC GTGTATAATA ATGGTGTTTT TGAACGCGTT
AATAAGGTTG AATTAAAGGA TGGAATAGTG ATAAGGCTAG GCATATACAC TATAATAAGG
ATAAATCTGA TTCAGGGATA A
 
Protein sequence
MPTGLDAAMH NNKGNATLNV KDLGAETTSR VEQKPVKRIR ITFIESTTDS LKNTAVDLDV 
VYFDSITIGR APDNIVVIPD ITVSRRHAVI SRDSSGSIVL VDLNSKNGTY VYNNGVFERV
NKVELKDGIV IRLGIYTIIR INLIQG