Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1127 |
Symbol | |
ID | 5710171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1184776 |
End bp | 1185585 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641275627 |
Product | aldose 1-epimerase |
Protein accession | YP_001540945 |
Protein GI | 159041693 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0176464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.584187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGGC TTAGGGAAGG TAACTCCGAG GCCATTATTT ATGAAAGGGG GGCTTACCTA TACTCATGGA GTATTGGGGG AAGGGATATT ATCCTGAAGG GTAATCTTGA TGCACCAACC AGGGGAGGTA TGGCTATATT AATACCATAC GCCAATAGAG TAAAGGGGGC TGAGTACGTG TTTAATGGCG TTAAGTACAC GTTGCCTATT AAGTGGTGGC CACCTAGGGA GGATAATGCA ATTCACGGCC TAGTCCTTGA TAAGGACTTC ATAGTGAAGG AGTCAACAGT CAACTCAGTG CTGCTTAACT ACGTGCTTAG GCATAGTGGG TACCCGACAA TACTAGATAT CTTGGTTAAA TATGAACTCA GTGGTGATGC ATTAAAGGTT AGCTTCACCA TAAGTAATAT TGGGCCCTCA GAAGCACCAC TCACAGTTGG CGCCCACCCC TACTTCCTAG TATCCAGTGA CTGGAATATT AGGACTGGTG GCGAATCATA TCAATGCGAG GCAGTGGATA AAATACCCAC AGGTAGGTTG ATTAGGCGTG AATTAAGTAG GGGTGATTGG GATGACTGCT TCATTGTTGA TGACCCAATT GAATTAACAT CATCGTATTC AGGAATAGTA ATGACTAGGG TTAACATGAA GTACCTCCAA GTCTACACTG GTATCCCCAA TGCAGTTGCG GTTGAACCAA TGAGTGGTGC ACCTGACGCG TACCATAATG GAATGGGCCT CATAGTTATT AAACCCAATG AGACTAGGGA ATTCTCATTC ACGATTAAGG TAACTAGGAT TCCTACTTGA
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Protein sequence | MIRLREGNSE AIIYERGAYL YSWSIGGRDI ILKGNLDAPT RGGMAILIPY ANRVKGAEYV FNGVKYTLPI KWWPPREDNA IHGLVLDKDF IVKESTVNSV LLNYVLRHSG YPTILDILVK YELSGDALKV SFTISNIGPS EAPLTVGAHP YFLVSSDWNI RTGGESYQCE AVDKIPTGRL IRRELSRGDW DDCFIVDDPI ELTSSYSGIV MTRVNMKYLQ VYTGIPNAVA VEPMSGAPDA YHNGMGLIVI KPNETREFSF TIKVTRIPT
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