Gene Cmaq_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1123 
Symbol 
ID5710003 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1179216 
End bp1180568 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content49% 
IMG OID641275623 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001540941 
Protein GI159041689 
COG category[R] General function prediction only 
COG ID[COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.305322 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.805934 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAGGA AAGTAGTCAT AATAGGTGCC GGTGCCGCGG GTGCATCGGC GGCTGCTAGG 
GCTAGGAGAC TTGACCCTGA GGCTGAGGTT ACCCTTATTG ATAAGGGGCC ATTAATCAGT
CACGCACCCT GTGGAATACC ATACTACATA GGTGGTGTTG TTAAGGATGC TGGTGAATTA
GCCGTATATA GCCCGGAGGA ATTCGCCAGG GAGAGGAGGA TTAATGTTAG GGTTAACGCT
GAGGCCATTG ATGTTGATTC AAGTAACCGC ATAGTGCTTG TTAAGGAGGG TAATAGTGTT
GTTAAGTATG AGTGGGATGT CTTAATATTA GCCACTGGGG CTAAGCCAAT AGTACCATCA
ATTGAGGGAA ATGACTTGAG GGGTGTGTTG ACGCTTAGGC TCCCCCATGA GGCAGGTAGG
CTTAGGGAGG AGGCGTTGAG GGCTGATAAA GTGGCTGTAA TTGGGGGTGG TTACATAGGC
CTTGAACTGG CTGAGGCCTT AAGGGCATTG GGTAAGAGGG TGATGCTCTT TGAAATGATG
CCTCACGTCC TACCCTCAAC CCTAGACGAG GACTTAGCTA AGCTAATACA TGATGAGTTA
ATTAAGAATA ACGTGGAACT ACACTTAAGC GAGAAGGTTG TAGGGTTCCG TGGTGTTAAT
GGGGAGGTTA AGAGTGTTAT AACTGATAAG GGTGAGTATA ATGTTGATAA AGTATTCATG
GGGGTGGGGG TTAGACCTGA CGTGGACTTA GCCTTAAAGG CTGGTGTTAA GCTTGGTGAA
ACTGGTGCAG TTTACGTTAA TGAGTACATG GAGACCAGTG TACCGGGTAT TTACGCTGCG
GGTGATGTGG CTGAGACGTG GAGTATGGTG ACGGGGAGGA GGATGTATGT TGCCCTTGCC
CCACCAGCCA ATAAAATGGG TCAGGTGGCG GGTGCTAACG CGGTTAAGGG TAGGTTCCTA
AAGTTCCCGG GGGTGCTTGG TACTGCGATA ACTAAGGTGT TTAACCTATA CGTGGCTAGG
ACAGGCTTAA CGGAGAGGCA GGCTAGGGAA TGGGGATTTA AACCATACTC AGCCACCGTT
AAGGTTAAGA CAACAGCCCA CTACTACCCC GGGGGTGGTG TTGCCACAAT AAGGCTTACA
GCAGATGAGG ATACTGGTAG GGTTATTGGA GCGCAGGTGA TTGGTAATGA TAGGCTCATT
GCAGGTTACA TTGATACTGC AGCAGCCTTA ATAGGTAAGG GGGCTACTGT TGATGACTTC
TTCTTCGCCG ACTTATCCTA CTCACCGCCA ACTGCACCTG TGTGGCATGG TTTAATAGTG
GCTGCTAGGG TTCTCTCAAG GGGTAAGTAT TAG
 
Protein sequence
MTRKVVIIGA GAAGASAAAR ARRLDPEAEV TLIDKGPLIS HAPCGIPYYI GGVVKDAGEL 
AVYSPEEFAR ERRINVRVNA EAIDVDSSNR IVLVKEGNSV VKYEWDVLIL ATGAKPIVPS
IEGNDLRGVL TLRLPHEAGR LREEALRADK VAVIGGGYIG LELAEALRAL GKRVMLFEMM
PHVLPSTLDE DLAKLIHDEL IKNNVELHLS EKVVGFRGVN GEVKSVITDK GEYNVDKVFM
GVGVRPDVDL ALKAGVKLGE TGAVYVNEYM ETSVPGIYAA GDVAETWSMV TGRRMYVALA
PPANKMGQVA GANAVKGRFL KFPGVLGTAI TKVFNLYVAR TGLTERQARE WGFKPYSATV
KVKTTAHYYP GGGVATIRLT ADEDTGRVIG AQVIGNDRLI AGYIDTAAAL IGKGATVDDF
FFADLSYSPP TAPVWHGLIV AARVLSRGKY