| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1122 |
|---|
| Symbol | |
|---|
| ID | 5710002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | - |
|---|
| Start bp | 1177850 |
|---|
| End bp | 1179103 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275622 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001540940 |
|---|
| Protein GI | 159041688 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.775323 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCGAG AGATGCAGGT AGCGTTATTC ACCATATTAT CCTCACTAAC CGGGGGACAC
GTGAGGATAC TGGAGACCTC CTCCAGATAC CCTAGGAGAC CTACTTTCCT AATACCTAGG
AATTACTACG TTAAACTCCT AAACATGCTT GATGTTTACT TTGAGGGGAG GTTCAGGGAC
TTCGTGATTA ATAATACAGT TGAGTTACCG CCCATGGAGA TAACTCGCTT CTACGCTTAC
CCTAAATACA TTTACGACGC CATGAATAAT ATTAAGAGGG ATCTACAGTA CTTTGACTTA
CTATATGTTC CACATGAGCA CGTGGGCATG ATGATGCTTC TTAAGAGTAT TGGCGTTAAG
TGGACTGCCT TACTTCAATT AACCCCGGTG ATTGGGGCAA TTGACATTGA CTTACCTATG
AATCCAATAA GATTAATGTC CCTTAACCTG AGGCTAAACG GTATGGGTTA CATTGGCGAT
AAGTTATTCG AGTACTTAAT AGCTAAGGTA GTGTTATCCG GGGAGACTGT GCTGTCGGTG
TCTAAGTCAA TACCCTATGA GATGAGGCTC ATGGGTTTAA GGGCTAGGGT TAAGGTACTT
GACCCAGGTG TGGGTATTGA TGAGTCATGT TGGAGGTGCG GTGATAAGGA CATTGACTTA
GTCTTCTTCG GTAGATTAAA GAGGGAGAAG GGGGTCTTCG ACTTCATTAA AGTCCTAAAC
ATAATGCACA GGAGAATGGG GCTTAAGCCT AAGGCAATGA TAATGGGGGC TGCTGATGAT
GATACGCCAA GGATTGTGAA GGCTAGGTTA AGGAGACTAG GGTTAAGTGA ATTCACAGAG
GTTAGGGTTA ACTTAACTAG GCGTGAATTA TTGAGTTACC TAGCTAGGGC TAGGGTATTC
GTGTACCCCA CTAGATTGGA TTCAATAGGG TTAGTTGTCA TTGAGGCCTT AGCCCACGGT
GTACCAGTGG TTACTTACGA TATACCTGCA ATTAGGTTTA ATTACAGGAC TAGGGCGGTT
TTAAGGGTTC CCTTTAGGGA CATTAACTCC ATGGCTCTCG CTGCGGCTAA GCTGCTTACT
GATGAGGAGT ATAGGGAGCA GTTGGCTAAC GAGGGCTTAA TATTCATTAA GAGATTTGAT
TGGACTAATG TTGCCCTCAA CGAGTGGGAG ATGTTAGGTA GAATAGCCTA CGAGGAGACT
GAGGAGACTA GTGTTAAGGT ACCTAGGGTG GTTGATTCTA TTCGCGTCAT TTAA
|
|---|
| Protein sequence | MTREMQVALF TILSSLTGGH VRILETSSRY PRRPTFLIPR NYYVKLLNML DVYFEGRFRD
FVINNTVELP PMEITRFYAY PKYIYDAMNN IKRDLQYFDL LYVPHEHVGM MMLLKSIGVK
WTALLQLTPV IGAIDIDLPM NPIRLMSLNL RLNGMGYIGD KLFEYLIAKV VLSGETVLSV
SKSIPYEMRL MGLRARVKVL DPGVGIDESC WRCGDKDIDL VFFGRLKREK GVFDFIKVLN
IMHRRMGLKP KAMIMGAADD DTPRIVKARL RRLGLSEFTE VRVNLTRREL LSYLARARVF
VYPTRLDSIG LVVIEALAHG VPVVTYDIPA IRFNYRTRAV LRVPFRDINS MALAAAKLLT
DEEYREQLAN EGLIFIKRFD WTNVALNEWE MLGRIAYEET EETSVKVPRV VDSIRVI
|
|---|
| |