| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1121 |
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| Symbol | hemC |
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| ID | 5710294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1176885 |
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| End bp | 1177802 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275621 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001540939 |
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| Protein GI | 159041687 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.878665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTATTA GGATAGCCAC GAGGGGTTCG GCGTTATCCC TTAAGCAAAC TAAGATAGTT
ATGGATAGGA TACTTGAGTT TAATAAGGAT GTTGAGTTTA AGCTAATTAT AGTTAAGACT
ACTGGTGATG TTGACTTAAG TAAGCCACTT TATGAAATAG GGGTTAAGGG TATTTTCGAG
AGGGAGGTTA ATCAGGCAGT GCTCAGGGGT GAGGCTGATG TGGCTGTACA TAGTTTAAAG
GATATGCCGG CTCAAATAAG TAATGACTTA ACACTAGTAA TGACACCTCC AAGGGATAAT
CCGAGGGATG CCTTAGTATC CCTCAGGCAG TACACGGTGG ATACATTACC CCTCAACTCA
ATTGTTGGTA CATCAAGCCT TAGGAGGAGG GGATTCCTAC TCTCCCTAAG GCGTGACGTT
ACGGTGAAGC CCATTAGGGG TAATGTTGAT ACGAGGATTA GGAAGCTTAA TAATGGTGAA
TACGATGCCT TAATCATGGC TGCCGCAGGC CTGGAGAGAC TTAGCATTAA TGCTAATGTA
AGTGAAATAA GCCCTGAATT AATGCCACCA GCCCCTGGAC AAGGTATAAT TGGTGTTGTT
GCAAGGAGGG ATAGGGATGA TTTAATTAAG GTACTGAGGC GTAGTAGTGA TGAGGAAACA
TTCAAGGAGG CTGCGGCTGA GCGTGCTTTC CTAAGTAGAA TAGGGGCTGG TTGCCACGTA
CCCTTAGGGG GCTTGGCGTT ACTGGATGAT GGATACTTCG ACTTCACTTA TGGGGTAGTG
GATCCTGATG GTGTTGAGAA GTTCATTAAC TCAACCAGGA TTGATGCCAG GAACCCTGAG
GAGGCTGGTA GGGTGGCTGC TGAAGATTTA CTGAGGAATG CCCGTGGATT GGTGGCTAGG
TTGCTTAAGT ACTCCTAA
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| Protein sequence | MIIRIATRGS ALSLKQTKIV MDRILEFNKD VEFKLIIVKT TGDVDLSKPL YEIGVKGIFE
REVNQAVLRG EADVAVHSLK DMPAQISNDL TLVMTPPRDN PRDALVSLRQ YTVDTLPLNS
IVGTSSLRRR GFLLSLRRDV TVKPIRGNVD TRIRKLNNGE YDALIMAAAG LERLSINANV
SEISPELMPP APGQGIIGVV ARRDRDDLIK VLRRSSDEET FKEAAAERAF LSRIGAGCHV
PLGGLALLDD GYFDFTYGVV DPDGVEKFIN STRIDARNPE EAGRVAAEDL LRNARGLVAR
LLKYS
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