Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1112 |
Symbol | |
ID | 5709824 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1170047 |
End bp | 1170613 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275612 |
Product | phosphodiesterase |
Protein accession | YP_001540930 |
Protein GI | 159041678 |
COG category | [R] General function prediction only |
COG ID | [COG0622] Predicted phosphoesterase |
TIGRFAM ID | [TIGR00040] phosphoesterase, MJ0936 family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.279035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGGC TAGCTGTAGT GGGTGATACC CATATAGTTA ATGGTGGATT ACCTGATAAT TGCCTATTGA GGCTTATCAC CAACGGGCAC TTTGACTTAA TAATCCACAC TGGTGATTTA TCTAATGAAC ATGTTTTAAA TGATTTAAGG AAACTGGGTG AATTAATAGT GGTTGCTGGT GAAAGCGATC CAATGCCGTT GCCGGATAAG GAGTTGCTTG AACTTGAGGG TTTAAGGCTT CTCATTATTC ATGGTCATCA GAAGGAGGCT AGGCTGCATT TAAGGAGGCT AGCCCATTAC TTTAACGCCA GATTAGTGTT AACTGGCCAT ACTCATAAGG CAATGATCCA GGACCTGGGT GAATTAATAG TGGTTAATCC TGGTTCATTA ATGGGTTTAA ACAGTGGGGA TGGAACCATG GCCATCATTA CCTTGGATTC AGGACTAATT AGGGTGAGGA TTCAGGGATG CGGGTGGTTT AACGAGAGTG AGTTTGGTGG ATTAATAATG AGGGCTGATG AACTCACTAA GCCTAATAAT GGGATTGAGT CAGGATCCTC CTTATGA
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Protein sequence | MIRLAVVGDT HIVNGGLPDN CLLRLITNGH FDLIIHTGDL SNEHVLNDLR KLGELIVVAG ESDPMPLPDK ELLELEGLRL LIIHGHQKEA RLHLRRLAHY FNARLVLTGH THKAMIQDLG ELIVVNPGSL MGLNSGDGTM AIITLDSGLI RVRIQGCGWF NESEFGGLIM RADELTKPNN GIESGSSL
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