Gene Cmaq_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1112 
Symbol 
ID5709824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1170047 
End bp1170613 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content42% 
IMG OID641275612 
Productphosphodiesterase 
Protein accessionYP_001540930 
Protein GI159041678 
COG category[R] General function prediction only 
COG ID[COG0622] Predicted phosphoesterase 
TIGRFAM ID[TIGR00040] phosphoesterase, MJ0936 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.279035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGGC TAGCTGTAGT GGGTGATACC CATATAGTTA ATGGTGGATT ACCTGATAAT 
TGCCTATTGA GGCTTATCAC CAACGGGCAC TTTGACTTAA TAATCCACAC TGGTGATTTA
TCTAATGAAC ATGTTTTAAA TGATTTAAGG AAACTGGGTG AATTAATAGT GGTTGCTGGT
GAAAGCGATC CAATGCCGTT GCCGGATAAG GAGTTGCTTG AACTTGAGGG TTTAAGGCTT
CTCATTATTC ATGGTCATCA GAAGGAGGCT AGGCTGCATT TAAGGAGGCT AGCCCATTAC
TTTAACGCCA GATTAGTGTT AACTGGCCAT ACTCATAAGG CAATGATCCA GGACCTGGGT
GAATTAATAG TGGTTAATCC TGGTTCATTA ATGGGTTTAA ACAGTGGGGA TGGAACCATG
GCCATCATTA CCTTGGATTC AGGACTAATT AGGGTGAGGA TTCAGGGATG CGGGTGGTTT
AACGAGAGTG AGTTTGGTGG ATTAATAATG AGGGCTGATG AACTCACTAA GCCTAATAAT
GGGATTGAGT CAGGATCCTC CTTATGA
 
Protein sequence
MIRLAVVGDT HIVNGGLPDN CLLRLITNGH FDLIIHTGDL SNEHVLNDLR KLGELIVVAG 
ESDPMPLPDK ELLELEGLRL LIIHGHQKEA RLHLRRLAHY FNARLVLTGH THKAMIQDLG
ELIVVNPGSL MGLNSGDGTM AIITLDSGLI RVRIQGCGWF NESEFGGLIM RADELTKPNN
GIESGSSL