| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1107 |
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| Symbol | |
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| ID | 5709910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1166104 |
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| End bp | 1167084 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641275607 |
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| Product | spermidine synthase |
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| Protein accession | YP_001540925 |
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| Protein GI | 159041673 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTAATA AGGGGACTAT GCATTACTCA TGGCGATTAG GCGTAATGAG TAGTGTAATG
GATCAGGTTA GTAGAATGGG TACGTACTTC ATAGAGTTTG AGACTCCATT CAGTTGGCAT
TTAAGGGCTG TTAATAGGGT CCTCTACTCA GGTGAATCAA AGTACCAGAG GATAGCTGTG
GTTGAGTTTA AGGATTTAGG TAAGGCACTG GTGCTTGATG GTAAGGTTCA GAGTTCGTTA
TTCGATGAGT ATGTTTACCA TGAATCCCTA GTTCACCCAG CAATGGTGCT TAATGGGAAT
CCAGAGAGGG TGCTTATAAT TGGTGGAGGG GAGGGTGCAA CAGCTAGGGA GGTGCTTAAG
TGGGATACGG TTAAGGAAGT GGTGATGGTT GATATTGATG AGGAGGTGGT TAGGGTTTCC
AAGGAGTATT TACCTGAAAT GCACGGTGGA TCATTCTACG ATAAGAGGTT CAAACTGATT
ATAGGTGATG GGAGGAGGTT CCTGGAGGAA TCCAGTGAGA AGTTTGATGT AATAATAGTT
GATGCAACAG ATCCATTGGA GGGTGGTCCC TCATACCTCC TCTACACTGT TGAATTCTAT
AAGCTTGCTA AAAGTAGGCT CACACCCAAT GGAGTCTTAG CCACGCAGGC AACCAACATG
GCTTATGCCT TAAGGGTTCT ATCAGTGATA TACAGGACTA TTGGGAGTGT GTTCAGTAAG
GTGAGGCCTT ATCAATCATA CATGCACTCC TACGATGCCC CCTGGGGATT CATGGTGGCC
AGTGATACTG CTGATGCCCT TCAATTAACT CAAGCGGATG TTGATAACGC CTTAATGAGG
CATGTTAAGG GTAATACCAG GTATTACGAT GGGTTAACCC ACGTTCACAT GTTCACTTTA
CCAAGGCACA TAAGAATCGC ACTTGAAGAT AAGGAGGTTA AGCCAGCCAC TGACTCAAAC
CCAACCTTCA TGCCCATGTA G
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| Protein sequence | MLNKGTMHYS WRLGVMSSVM DQVSRMGTYF IEFETPFSWH LRAVNRVLYS GESKYQRIAV
VEFKDLGKAL VLDGKVQSSL FDEYVYHESL VHPAMVLNGN PERVLIIGGG EGATAREVLK
WDTVKEVVMV DIDEEVVRVS KEYLPEMHGG SFYDKRFKLI IGDGRRFLEE SSEKFDVIIV
DATDPLEGGP SYLLYTVEFY KLAKSRLTPN GVLATQATNM AYALRVLSVI YRTIGSVFSK
VRPYQSYMHS YDAPWGFMVA SDTADALQLT QADVDNALMR HVKGNTRYYD GLTHVHMFTL
PRHIRIALED KEVKPATDSN PTFMPM
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