Gene Cmaq_1097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1097 
Symbol 
ID5708980 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1154757 
End bp1155644 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content42% 
IMG OID641275596 
Product6-phosphogluconate dehydrogenase NAD-binding 
Protein accessionYP_001540915 
Protein GI159041663 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTAATG TAGGGTTAAT AGGGTTAGGT ACAATGGGCT GGAGGATTGC CAAGAATCTT 
AAGGATGATG GATTATTAAT AGGGGTGTTT AATAGGACTA TGAGCAAGGC CATTAAGTTC
GCTGAGGAGA ATAAGGTTAA TGTGTTCAAT AACCCTGCTG AATTAGCTAG GAACGTTGAT
GTAGTATTAT CAATAGTGTC TGATGATGAT GCCGTTAAAT CCATTATGCT GGGTGAGAAC
GGTGTAATTA ATGGGATTAA GCAAGGTTCC CTAGTGATTG AAATGTCAAC AATATCACCC
TCCACATCAA TTGAGTTAGC TAACAAGATT AAGGAGAAGG GTGGGTTAAT GGTTGATGCA
CCAATCATAG GTACTTCAAT ACTCATTGAG AAGCGTGAGG CTGTGGTACT TATTGGTGGT
GAGAGGGAAG CTTACGAGAG GGCCTACGAG GTAGTTAAGC ACTTTGCCCG CTATGTAGTT
CACGTTGGGC CAAATGGGTA TGGACTCTAC GCAAAGTTAA TTAATAATGC CCTACTCGGC
TCCTACGTAG CAGCATTAGC CGAGGTGGTT AATTTAGGTG AAGCCATGGG GTTAAGCAGT
AGTGTAATAA TGGATGTTTT AACTAAACTG TCAAGTGCTA GGTCACCAAC CTCGGAACTT
AAGGTACCTA AGATGATTAA CAATGATTTC ACCACTCAAT TCGCCACTAA ACACATGAGA
AAGGACCTCG ACTTGGTTAA TAAGGAGGCT AGCAGGTTAG GGGTCCCAGT ACCAATGGCT
GCATTGGCGC TTCAATTATA TAGAATGAGC GAGGCAGATG GGTTAAGTGA TGATGATTTC
TCAGCAGTAA TTAAGATACT TAAGAGACGT AACTCAACTC AACGTTAA
 
Protein sequence
MVNVGLIGLG TMGWRIAKNL KDDGLLIGVF NRTMSKAIKF AEENKVNVFN NPAELARNVD 
VVLSIVSDDD AVKSIMLGEN GVINGIKQGS LVIEMSTISP STSIELANKI KEKGGLMVDA
PIIGTSILIE KREAVVLIGG EREAYERAYE VVKHFARYVV HVGPNGYGLY AKLINNALLG
SYVAALAEVV NLGEAMGLSS SVIMDVLTKL SSARSPTSEL KVPKMINNDF TTQFATKHMR
KDLDLVNKEA SRLGVPVPMA ALALQLYRMS EADGLSDDDF SAVIKILKRR NSTQR