Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1097 |
Symbol | |
ID | 5708980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1154757 |
End bp | 1155644 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275596 |
Product | 6-phosphogluconate dehydrogenase NAD-binding |
Protein accession | YP_001540915 |
Protein GI | 159041663 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTTAATG TAGGGTTAAT AGGGTTAGGT ACAATGGGCT GGAGGATTGC CAAGAATCTT AAGGATGATG GATTATTAAT AGGGGTGTTT AATAGGACTA TGAGCAAGGC CATTAAGTTC GCTGAGGAGA ATAAGGTTAA TGTGTTCAAT AACCCTGCTG AATTAGCTAG GAACGTTGAT GTAGTATTAT CAATAGTGTC TGATGATGAT GCCGTTAAAT CCATTATGCT GGGTGAGAAC GGTGTAATTA ATGGGATTAA GCAAGGTTCC CTAGTGATTG AAATGTCAAC AATATCACCC TCCACATCAA TTGAGTTAGC TAACAAGATT AAGGAGAAGG GTGGGTTAAT GGTTGATGCA CCAATCATAG GTACTTCAAT ACTCATTGAG AAGCGTGAGG CTGTGGTACT TATTGGTGGT GAGAGGGAAG CTTACGAGAG GGCCTACGAG GTAGTTAAGC ACTTTGCCCG CTATGTAGTT CACGTTGGGC CAAATGGGTA TGGACTCTAC GCAAAGTTAA TTAATAATGC CCTACTCGGC TCCTACGTAG CAGCATTAGC CGAGGTGGTT AATTTAGGTG AAGCCATGGG GTTAAGCAGT AGTGTAATAA TGGATGTTTT AACTAAACTG TCAAGTGCTA GGTCACCAAC CTCGGAACTT AAGGTACCTA AGATGATTAA CAATGATTTC ACCACTCAAT TCGCCACTAA ACACATGAGA AAGGACCTCG ACTTGGTTAA TAAGGAGGCT AGCAGGTTAG GGGTCCCAGT ACCAATGGCT GCATTGGCGC TTCAATTATA TAGAATGAGC GAGGCAGATG GGTTAAGTGA TGATGATTTC TCAGCAGTAA TTAAGATACT TAAGAGACGT AACTCAACTC AACGTTAA
|
Protein sequence | MVNVGLIGLG TMGWRIAKNL KDDGLLIGVF NRTMSKAIKF AEENKVNVFN NPAELARNVD VVLSIVSDDD AVKSIMLGEN GVINGIKQGS LVIEMSTISP STSIELANKI KEKGGLMVDA PIIGTSILIE KREAVVLIGG EREAYERAYE VVKHFARYVV HVGPNGYGLY AKLINNALLG SYVAALAEVV NLGEAMGLSS SVIMDVLTKL SSARSPTSEL KVPKMINNDF TTQFATKHMR KDLDLVNKEA SRLGVPVPMA ALALQLYRMS EADGLSDDDF SAVIKILKRR NSTQR
|
| |