Gene Cmaq_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1096 
Symbol 
ID5708979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1153701 
End bp1154630 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content42% 
IMG OID641275595 
Productbeta-lactamase domain-containing protein 
Protein accessionYP_001540914 
Protein GI159041662 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAGG TTACTATTAG GGATTTAACC AGTAGGGTTA GTCTCGTAGG TACGTATTAC 
GGTGATGTTG AGTTAAACAT GGTTTACGTA AAGGATAGTG GAGTATTACT CGATACATCA
ACCTCAAGCA TAATTGAGGA TGTGGTTAAG GTAATAGGGC TACCTAAGGT GGCTATAATA
ACGCATCCCC ATGAGGATCA TGCAGGTGGA AGCGGTTACT TAGCCAGTAG GGGTGTTAGG
GTGATTGCGC ATGAGGCTGC CAGAGGGTTC TTATACAATA ATGTCATTAA CGTGGATTCC
TTCTTCTCAC TTAAATATAG GTCATGCTTC ACCCCTGAAT TCACGGAATC CTTCATAAGA
GACTTTAGGA GTAAAGTTGG TTCACCAGTG GTTCACGAAT CCTTTAGAGG TATGCTTAAT
TTAAATGGCG TTAAGTGTAT TGAAGCCTTC GGCCACACTT CAGGTACTGT GGTGTGTATT
GTGGATGATG TAATGTTTAC ATCAGACGCA GTGCAGGGTT TAGGCATAAG GGGGTTGAGT
ACAACAGATT CAATACCACA GGTTTCATCG ATTGACGATT ACTTACAGAC ACTGAATACG
CTTAAGAGTA TTAAGGTTAA GATGCTTGTA CCAGGGCATA ATTACCTACC ATTCTCCAAG
AGGGTTCTTG AGGGGAATGA AGTTGAAGAA TTTATTGAAG CCTCAATTGA GGCTATGAAT
AGGCTACTGG GGATAGCCAA GGTACTCCTC AGTGAAAGAC CATTAACAAT CTGCGAGTTT
GCGGATAACC TGATACATGA GTATGGGGTT AAGAGGAGCC TGTACCCACA GGCCTTAATA
ACAGCCAACG CTATAATAAG ATTCTATAAG AGGAGGAGGC TGCTTAGGAT TATTAAGGAG
GGTGATGTTG AACTTTACTC AATTAAGTGA
 
Protein sequence
MVEVTIRDLT SRVSLVGTYY GDVELNMVYV KDSGVLLDTS TSSIIEDVVK VIGLPKVAII 
THPHEDHAGG SGYLASRGVR VIAHEAARGF LYNNVINVDS FFSLKYRSCF TPEFTESFIR
DFRSKVGSPV VHESFRGMLN LNGVKCIEAF GHTSGTVVCI VDDVMFTSDA VQGLGIRGLS
TTDSIPQVSS IDDYLQTLNT LKSIKVKMLV PGHNYLPFSK RVLEGNEVEE FIEASIEAMN
RLLGIAKVLL SERPLTICEF ADNLIHEYGV KRSLYPQALI TANAIIRFYK RRRLLRIIKE
GDVELYSIK