Gene Cmaq_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1094 
Symbol 
ID5709525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1150539 
End bp1151663 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content45% 
IMG OID641275593 
Producthypothetical protein 
Protein accessionYP_001540912 
Protein GI159041660 
COG category[S] Function unknown 
COG ID[COG1814] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA TGAGTCAGCA TAGTGAGGTA ATGGGTAACA TTGACTATGT TGGGTTCTAT 
AAGGATGAGT TAACGGATTA CTACGTGTAC AGTACCCTTG CTAGGGTTGA GAGGAATAAG
GATAGAAGGA GCGCGTTAAT GGAGATTGCC TCAACAGAAC TTAGACATGC TAAGTATTGG
GAGGCAAGGG CTAGGGAGTT AGGGTTAAGT GTTGGTGAGT TTAAGGTTCC GTGGCTTAAG
ATTATTTTCT ACCTAACCCT AAGGCTACTC TTCGGTCTTG CAGTTGTTAT TAGGCTTAGG
GAGAGAGAGG AGGATGAGGC TATAGTAAGG TATGTTAACG CCAGGGATGT TGTTAAGGAT
CCTGCGCTTG ATGAGATAAT TAAGGATGAG GTAATACATG AGGATTACTT CATAGAGGAG
GCAACTAAGA TGAGTGAACG CTTCAATAAT ATTAGGGACT TCATATACGG TATGAGTGAT
GGCCTAGTTG AAGTAATGGC AGCATTAGCC GGATTAGTGC CCGTTGTAGT TAACCCACTG
TTAATAGCCA TGGCCGGCTT AATAGTTGGT GTTGCCGGTA CAATATCAAT GAGTATAGGA
GCCTACATGT CTGTTAAGGC TCAGTCCGAG TTAATGAACT ACAGGGTGAA TAAGGTTAAG
ACAGCCCTCA GGGTAATGCC CATTAGCACC GTTACCGATA AGGTACTTGA CATTTTAAAA
AGCAGCGGCG TACCCGAGGA GAAGGCTAGG AGTATTGCAA GGGAATTAAG CGAATATAAG
GATGCGGTAT CGGACATGGT TATAACAAGG GAATTAGGCT ACGTGGAGTC CACTGAGAAT
GCCGCTAAAT CAGCCGTGAG CACCGGTGTA TCCTACATAA TCGGCGCTGC CTTAGTCATA
TTACCGTTCC CAACCATTGG ATTAGTGAAC AGGTATGCGG CATTATTCAC GTCAATAGTA
CTAATGATTA TAGCTACATC AGTGGCCGGT GTATTCACTG CAGCTTCAAG TAACGCTAAG
ATGCGTAGTG TTATTGCGAG GAATGTTGGA TTAAGCCTAC TTGCATTAAC GGTAACATAC
CTAGTGGGTT CACTGGCCCA TGCCCTAGGC GCCACGGTTA CGTGA
 
Protein sequence
MAAMSQHSEV MGNIDYVGFY KDELTDYYVY STLARVERNK DRRSALMEIA STELRHAKYW 
EARARELGLS VGEFKVPWLK IIFYLTLRLL FGLAVVIRLR EREEDEAIVR YVNARDVVKD
PALDEIIKDE VIHEDYFIEE ATKMSERFNN IRDFIYGMSD GLVEVMAALA GLVPVVVNPL
LIAMAGLIVG VAGTISMSIG AYMSVKAQSE LMNYRVNKVK TALRVMPIST VTDKVLDILK
SSGVPEEKAR SIARELSEYK DAVSDMVITR ELGYVESTEN AAKSAVSTGV SYIIGAALVI
LPFPTIGLVN RYAALFTSIV LMIIATSVAG VFTAASSNAK MRSVIARNVG LSLLALTVTY
LVGSLAHALG ATVT