Gene Cmaq_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1090 
Symbol 
ID5710397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1144432 
End bp1145484 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content42% 
IMG OID641275589 
Producthypothetical protein 
Protein accessionYP_001540908 
Protein GI159041656 
COG category[S] Function unknown 
COG ID[COG1817] Uncharacterized protein conserved in archaea 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.399019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATAT GGTTTGATGC ATTAACGGCT AAGCAGGCTA GAATAGCCTC AGTGTTGGTG 
CTGGAGGGTG GGAGGAGGGG TTACGGGTTC ATAATTACAT GTAGGAATTA CGATTACGTA
ATTAATGTGT TAAAGATGTA TGGTGTAAAT GGATACTGTG AGGGTAAGCA CGGTGAGGAT
ACTAAGAGTA AACTGATTAA TGGGCTTACC AGGAGCCTTA AATTAATCAA TATAGTTAAT
GGTTTTAATG TCCACGTATC ATTAACATCA CCTGATGCTT TTCGAGTAGC CTTCGGTTTA
GGTAAACCAT CAATAGCCTT AACGGATACT GCCCACGCAT TCCATGTTAA TAAATTAACA
TTACCCCTAG CCAGCAGTGT TATTGCGCCT GCAGCCATAC CTAAGAGGAG GCTGATGGCC
TATATTCCAC ATGGGGAGGA GGGTAAGGTT AAGTTCTTTA ACGGTGTCTT TGAGGTAATG
TGGGTTTATA GGTTTAAGCC TAATTGGGGT GAGGTTGAGC AATTGGGTTT AAGGAATGGT
GATGAGTATG TTGTGTTTAG GTTTGAGGAG AGTAAGGCAG CCTACTATAA TTACAGTGAA
CAGTCTAAGA TTGCAGTTAA GGCTATTAAA CTCCTATTAA AGGAGGGCTT TAAGGTTATT
GTATTCCCTA GGTATGATGA CCAGAGGAAG TTAGTGATGA GTAAGTTCCC CCAGGAATTA
AAGAATAATA ACGTGATAAT GCCGGATAAG CCTATTGACG GCCTTCAATT AGCCTACTAC
TCAAGTCTAG TTATAACTGG TGGATCAACC TTCGCAGTGG AGGCTGCGTT ACTGGGTGTT
CCATCGATAT CGTACTTCCC ATCAACCTAC TACACTGATA AGTATGTGAT TAAGGCTGGT
GCACCATTAA TTAGGGTTAA GCCAAGTAGG CTAGTTTTCA GCATACGTAA GGCTATGGGA
ATGGGTAAGG TAGGTTTAAT AAAGGGCCTT GAAGACCCCA CGGATTTGAT ACTTAATGAG
GCTGACATGT TGGCTAACGA AAATAAGGGA TAA
 
Protein sequence
MLIWFDALTA KQARIASVLV LEGGRRGYGF IITCRNYDYV INVLKMYGVN GYCEGKHGED 
TKSKLINGLT RSLKLINIVN GFNVHVSLTS PDAFRVAFGL GKPSIALTDT AHAFHVNKLT
LPLASSVIAP AAIPKRRLMA YIPHGEEGKV KFFNGVFEVM WVYRFKPNWG EVEQLGLRNG
DEYVVFRFEE SKAAYYNYSE QSKIAVKAIK LLLKEGFKVI VFPRYDDQRK LVMSKFPQEL
KNNNVIMPDK PIDGLQLAYY SSLVITGGST FAVEAALLGV PSISYFPSTY YTDKYVIKAG
APLIRVKPSR LVFSIRKAMG MGKVGLIKGL EDPTDLILNE ADMLANENKG