Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1090 |
Symbol | |
ID | 5710397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1144432 |
End bp | 1145484 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641275589 |
Product | hypothetical protein |
Protein accession | YP_001540908 |
Protein GI | 159041656 |
COG category | [S] Function unknown |
COG ID | [COG1817] Uncharacterized protein conserved in archaea |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.399019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTAATAT GGTTTGATGC ATTAACGGCT AAGCAGGCTA GAATAGCCTC AGTGTTGGTG CTGGAGGGTG GGAGGAGGGG TTACGGGTTC ATAATTACAT GTAGGAATTA CGATTACGTA ATTAATGTGT TAAAGATGTA TGGTGTAAAT GGATACTGTG AGGGTAAGCA CGGTGAGGAT ACTAAGAGTA AACTGATTAA TGGGCTTACC AGGAGCCTTA AATTAATCAA TATAGTTAAT GGTTTTAATG TCCACGTATC ATTAACATCA CCTGATGCTT TTCGAGTAGC CTTCGGTTTA GGTAAACCAT CAATAGCCTT AACGGATACT GCCCACGCAT TCCATGTTAA TAAATTAACA TTACCCCTAG CCAGCAGTGT TATTGCGCCT GCAGCCATAC CTAAGAGGAG GCTGATGGCC TATATTCCAC ATGGGGAGGA GGGTAAGGTT AAGTTCTTTA ACGGTGTCTT TGAGGTAATG TGGGTTTATA GGTTTAAGCC TAATTGGGGT GAGGTTGAGC AATTGGGTTT AAGGAATGGT GATGAGTATG TTGTGTTTAG GTTTGAGGAG AGTAAGGCAG CCTACTATAA TTACAGTGAA CAGTCTAAGA TTGCAGTTAA GGCTATTAAA CTCCTATTAA AGGAGGGCTT TAAGGTTATT GTATTCCCTA GGTATGATGA CCAGAGGAAG TTAGTGATGA GTAAGTTCCC CCAGGAATTA AAGAATAATA ACGTGATAAT GCCGGATAAG CCTATTGACG GCCTTCAATT AGCCTACTAC TCAAGTCTAG TTATAACTGG TGGATCAACC TTCGCAGTGG AGGCTGCGTT ACTGGGTGTT CCATCGATAT CGTACTTCCC ATCAACCTAC TACACTGATA AGTATGTGAT TAAGGCTGGT GCACCATTAA TTAGGGTTAA GCCAAGTAGG CTAGTTTTCA GCATACGTAA GGCTATGGGA ATGGGTAAGG TAGGTTTAAT AAAGGGCCTT GAAGACCCCA CGGATTTGAT ACTTAATGAG GCTGACATGT TGGCTAACGA AAATAAGGGA TAA
|
Protein sequence | MLIWFDALTA KQARIASVLV LEGGRRGYGF IITCRNYDYV INVLKMYGVN GYCEGKHGED TKSKLINGLT RSLKLINIVN GFNVHVSLTS PDAFRVAFGL GKPSIALTDT AHAFHVNKLT LPLASSVIAP AAIPKRRLMA YIPHGEEGKV KFFNGVFEVM WVYRFKPNWG EVEQLGLRNG DEYVVFRFEE SKAAYYNYSE QSKIAVKAIK LLLKEGFKVI VFPRYDDQRK LVMSKFPQEL KNNNVIMPDK PIDGLQLAYY SSLVITGGST FAVEAALLGV PSISYFPSTY YTDKYVIKAG APLIRVKPSR LVFSIRKAMG MGKVGLIKGL EDPTDLILNE ADMLANENKG
|
| |