| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1078 |
|---|
| Symbol | |
|---|
| ID | 5709566 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caldivirga maquilingensis IC-167 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009954 |
|---|
| Strand | + |
|---|
| Start bp | 1128676 |
|---|
| End bp | 1130091 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641275578 |
|---|
| Product | FeS assembly protein SufB |
|---|
| Protein accession | YP_001540897 |
|---|
| Protein GI | 159041645 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
|---|
| TIGRFAM ID | [TIGR01980] FeS assembly protein SufB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000122877 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.697067 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGATG TTAAGTTGAA TCTCATTAAG ATTGAGGATT TCTCAAACAT GCTTGGCTCA
GCTAAGCCGA TTAAGTGGGA TGTAACAATA ACAGGTAGGA TAAGTAGGGA TACTGTTGAG
GAGTTGAGTA GGATTAGGGG TGAGCCTGAT TGGATGAGGA GGCTTAGGTT AAGGGCCCTT
GAAATGTTTG AGAAGCAGCC TTGGCCAAAT TGGCTCCCCC TGGAGGGTAA CATTAACCTT
GAATCACTAA TCCTATACGC TAAGCCAAGT GTTGAGAGGG CTAGGTCATG GGATGAGTTA
CCTAGGGAAT TAAGGGAGTA CTATGAGGCG CTTCAAATAC CTGAAGTCGA GTCCAGGCTA
TTGGCTGGAG TCATTAGTCA AGTTGACTCA GGGGTTGTTT ATGAGAATGT TAGGAAGAGT
CTTGAGGAAG CTGGGGTTGT GGCAATGAGC ATGGATGAGG CTGTTAAGAG GTACCCTGAC
CTAGTTAAGC AGTACTTCAT GAAGATATTC CCACCTGAAT ATAAGTTCGC ATCACTTAAC
ATTGCATTAT GGAGCGGTGG AGTATTCGTC TACGTGCCAC CTAACACGCA TGTTAAAATG
CCCATGGAGC TCGTCGTATT AATTAGTAGT GCTAATGTTG GTCAATTCGA GCACTCACTC
ATCATTGTTG GTGAGAATTC CCAGGTTGAA TTAATAGTGG CTTGTGCAGC CCCAGTCTTC
AGTGGGCTTA GTCTACATGA TGGTGTAACC GAGGTTTACG TGCATAAGGG GGCTAGGGTT
AAGCTCGTTG ACATGAAGAA TTGGAGTAAG GGTGTTATCT ACTTCGGTAA TAATAGGGCA
ATAGCTGAAG CTAACACTAA TGTTGAGTGG CTTAGTGGTT CACTGGGTGG TAAAGTAACC
ATGGTTTACC CAATGACTGT GCTTAAGGGT GAATACGCTA AAACAACAGT CACCTCAGTG
GCCTTAGCCA ATGGATTAAC CTGGAAGGAG GAGGGCGCTA AGGTATTCCA TGATGCACCA
CACACGTCAA GTAAGGTAGT TAATAAGGGG GTGAGTGTAA ATGGTGGCAC CACCGTATAT
AGGGGTCTTG TTTACGTTAG GAGGGGTGCT AGGTTTGCTA GGTCTCATGT TTCATGTGAT
TCGCTTATTC TTGATGATAA GTCTAAGGCA TACACTATTC CTCATGATCA AGTATTCGAG
GACACGGCAG TGGTTACCCA CGAAGCCTAC ACAGGCAGAA TAAGCGAAGA TAAACTATTC
TACCTAAGAA GCAGAGGATT AAACGAAGAA GAAGCAAAAA GCCTAATAGT ACTTGGTTAC
TTCCATGATG TGATGGTTAA CCTACCTATG GAGTACATGT CAATATTCAA TAAGGCCATT
GAATTAGAGC TAAGCAAGAT GCATAAGGTT GGATGA
|
|---|
| Protein sequence | MSDVKLNLIK IEDFSNMLGS AKPIKWDVTI TGRISRDTVE ELSRIRGEPD WMRRLRLRAL
EMFEKQPWPN WLPLEGNINL ESLILYAKPS VERARSWDEL PRELREYYEA LQIPEVESRL
LAGVISQVDS GVVYENVRKS LEEAGVVAMS MDEAVKRYPD LVKQYFMKIF PPEYKFASLN
IALWSGGVFV YVPPNTHVKM PMELVVLISS ANVGQFEHSL IIVGENSQVE LIVACAAPVF
SGLSLHDGVT EVYVHKGARV KLVDMKNWSK GVIYFGNNRA IAEANTNVEW LSGSLGGKVT
MVYPMTVLKG EYAKTTVTSV ALANGLTWKE EGAKVFHDAP HTSSKVVNKG VSVNGGTTVY
RGLVYVRRGA RFARSHVSCD SLILDDKSKA YTIPHDQVFE DTAVVTHEAY TGRISEDKLF
YLRSRGLNEE EAKSLIVLGY FHDVMVNLPM EYMSIFNKAI ELELSKMHKV G
|
|---|
| |