Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1059 |
Symbol | |
ID | 5710097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1108103 |
End bp | 1108531 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275559 |
Product | hypothetical protein |
Protein accession | YP_001540878 |
Protein GI | 159041626 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000123116 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000473128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTCAAT TCACGGTAAG TAAGAGGACA AGCATACCTA AGGACACCTT ATGGAGCCTA GTCTCCAGGG TGGAGGATTA CCCGAAGTAC TGGCATGGAC ATAGAGAGGT TAAGGTAATA GGCAGTAGTG GGGGTAAACT TCTGGTTAAC ATTAGATTCG CCTTCAATGG CCCATTAAAC CACGGCACAG CCTACGTGGA GTTAGGCAAC TATACGGTTA CCTTCAACTT CCTTAAGGGT CCATTTAAAG GCACACACAT TATTAAGGTT AAGGATGGTG AATTAACCAG TGAATGGAAC ATTAAATTAA ACCCACTCCT AACCCCCATG AGTAAGTGGA TAATCAACCA CTTTAAGCAG GGTTCAGAGC ACGCCTTAGA GAGAATAATT AAGGACGCTG AATTAATAAT GAAGACCCCA AGCTCCTAA
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Protein sequence | MIQFTVSKRT SIPKDTLWSL VSRVEDYPKY WHGHREVKVI GSSGGKLLVN IRFAFNGPLN HGTAYVELGN YTVTFNFLKG PFKGTHIIKV KDGELTSEWN IKLNPLLTPM SKWIINHFKQ GSEHALERII KDAELIMKTP SS
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