Gene Cmaq_1059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1059 
Symbol 
ID5710097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1108103 
End bp1108531 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content43% 
IMG OID641275559 
Producthypothetical protein 
Protein accessionYP_001540878 
Protein GI159041626 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000123116 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000473128 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTCAAT TCACGGTAAG TAAGAGGACA AGCATACCTA AGGACACCTT ATGGAGCCTA 
GTCTCCAGGG TGGAGGATTA CCCGAAGTAC TGGCATGGAC ATAGAGAGGT TAAGGTAATA
GGCAGTAGTG GGGGTAAACT TCTGGTTAAC ATTAGATTCG CCTTCAATGG CCCATTAAAC
CACGGCACAG CCTACGTGGA GTTAGGCAAC TATACGGTTA CCTTCAACTT CCTTAAGGGT
CCATTTAAAG GCACACACAT TATTAAGGTT AAGGATGGTG AATTAACCAG TGAATGGAAC
ATTAAATTAA ACCCACTCCT AACCCCCATG AGTAAGTGGA TAATCAACCA CTTTAAGCAG
GGTTCAGAGC ACGCCTTAGA GAGAATAATT AAGGACGCTG AATTAATAAT GAAGACCCCA
AGCTCCTAA
 
Protein sequence
MIQFTVSKRT SIPKDTLWSL VSRVEDYPKY WHGHREVKVI GSSGGKLLVN IRFAFNGPLN 
HGTAYVELGN YTVTFNFLKG PFKGTHIIKV KDGELTSEWN IKLNPLLTPM SKWIINHFKQ
GSEHALERII KDAELIMKTP SS