Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1053 |
Symbol | |
ID | 5710311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1102895 |
End bp | 1104178 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641275553 |
Product | hypothetical protein |
Protein accession | YP_001540872 |
Protein GI | 159041620 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0062163 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0000000635319 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTCATTG AGGCATCGTA CAGTAAAGTA AACATAACGC CACCCATCGG CCTTAGACTA GGGGGTTATG CCCATAGGCT TGGTAAACCA TCAAACAGGG TTCACGATGA CTTATACGCT AGACTACTAT TATTATCCAG TGGTGATGTT GAAGTTATTA TTATTCAAAT GGATTTACTA GGCTTATACA GTAGGGATGC GTCACTAATT AGGAGGAGTG TGAGTAAGGT GACTGGGGTT AAGGAGGATA ACGTAATAGT AGCCTCAACC CACACTCACT CAGCGCCTGA AACCATTATA CCAATGTGGC CTAACACCCT ACCCTACAGT GGTGAGGAGA GGGTTAAGTA CAATGATTGG TTCACAGGAG TAGTGGGTAA GTTAACTGAG GCTGCGGGTA GGCTTAATGG TACTGAAAGG GTTGAGTTAA GTATTGGTGC AGGGGAGGTT GGTGAATTAT GCTTCAACAG GTCCTTTAAG GGTGGGTTAA TAAGTGGTGA ATCACCAATA CTAATGGTTA AGTTCAATAA GGGTAAGGTG GCTTTAATCA ACTACCCATG CCACCCAGTC TGCAACACTG ACTTAGGCTT CTCAGCGGAT TACCCCGGGG TTACATATGA GGTGCTTCTC AGTAACGGTG TCGAGTCAAT GTTCCTAACC GGGGCAGCAG GTGACATTGA TCCAATTAAG AAGGGTAGGG GTTTCATGAA TTACCTCGGG TACTCATTAT CCTCATCTGT GATTAAAGCC TTAAACTCCC TTAAACCCAC AGCCCCAGTC ATTAGTGTTA AGGGGATTAA AGTCACCCTA CCCCTTAGGA CTGTTAACAG GGAGGAGGCT GAGTTGAGGT ATGAGGAGGC GCTTAGGAGG GTTAAGGCTA AGGGTGGGTT ACCCAGTGAA CCCACTGAAT CAATATGGGT TGATGAGGAT TACTTAACGT TAATGTACAG TGATGAGGAG TATGAGGTCT CTAAGGATAA TAGAAGCCTC ATTGAGACTG AGGTAAACTT AGTGAGGATT GGGGACCTAC TCATGGTCAC TATACCGGGT GAACCATTCA TTGAATCAGC GTTAACCATT AGTAATGCAG CTGAGGGCAC GGGGTTTAGG GAAACCATGG TTGTTGGTTA CGTTAATGAC TACGTGGGTT ACATACCCAT TAAGGCATCA TTCATTAAGG GCACTTATGA GGCTAGGTTA GCCAGGTGGA GTAGGGTTAC CGATGAGGCT GAGGGGTTGA TTACTAGGGC TGTGGAATCT AACCTAAGGG AAGTGGCATC ATAA
|
Protein sequence | MVIEASYSKV NITPPIGLRL GGYAHRLGKP SNRVHDDLYA RLLLLSSGDV EVIIIQMDLL GLYSRDASLI RRSVSKVTGV KEDNVIVAST HTHSAPETII PMWPNTLPYS GEERVKYNDW FTGVVGKLTE AAGRLNGTER VELSIGAGEV GELCFNRSFK GGLISGESPI LMVKFNKGKV ALINYPCHPV CNTDLGFSAD YPGVTYEVLL SNGVESMFLT GAAGDIDPIK KGRGFMNYLG YSLSSSVIKA LNSLKPTAPV ISVKGIKVTL PLRTVNREEA ELRYEEALRR VKAKGGLPSE PTESIWVDED YLTLMYSDEE YEVSKDNRSL IETEVNLVRI GDLLMVTIPG EPFIESALTI SNAAEGTGFR ETMVVGYVND YVGYIPIKAS FIKGTYEARL ARWSRVTDEA EGLITRAVES NLREVAS
|
| |