Gene Cmaq_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1053 
Symbol 
ID5710311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1102895 
End bp1104178 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content45% 
IMG OID641275553 
Producthypothetical protein 
Protein accessionYP_001540872 
Protein GI159041620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0062163 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000000635319 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCATTG AGGCATCGTA CAGTAAAGTA AACATAACGC CACCCATCGG CCTTAGACTA 
GGGGGTTATG CCCATAGGCT TGGTAAACCA TCAAACAGGG TTCACGATGA CTTATACGCT
AGACTACTAT TATTATCCAG TGGTGATGTT GAAGTTATTA TTATTCAAAT GGATTTACTA
GGCTTATACA GTAGGGATGC GTCACTAATT AGGAGGAGTG TGAGTAAGGT GACTGGGGTT
AAGGAGGATA ACGTAATAGT AGCCTCAACC CACACTCACT CAGCGCCTGA AACCATTATA
CCAATGTGGC CTAACACCCT ACCCTACAGT GGTGAGGAGA GGGTTAAGTA CAATGATTGG
TTCACAGGAG TAGTGGGTAA GTTAACTGAG GCTGCGGGTA GGCTTAATGG TACTGAAAGG
GTTGAGTTAA GTATTGGTGC AGGGGAGGTT GGTGAATTAT GCTTCAACAG GTCCTTTAAG
GGTGGGTTAA TAAGTGGTGA ATCACCAATA CTAATGGTTA AGTTCAATAA GGGTAAGGTG
GCTTTAATCA ACTACCCATG CCACCCAGTC TGCAACACTG ACTTAGGCTT CTCAGCGGAT
TACCCCGGGG TTACATATGA GGTGCTTCTC AGTAACGGTG TCGAGTCAAT GTTCCTAACC
GGGGCAGCAG GTGACATTGA TCCAATTAAG AAGGGTAGGG GTTTCATGAA TTACCTCGGG
TACTCATTAT CCTCATCTGT GATTAAAGCC TTAAACTCCC TTAAACCCAC AGCCCCAGTC
ATTAGTGTTA AGGGGATTAA AGTCACCCTA CCCCTTAGGA CTGTTAACAG GGAGGAGGCT
GAGTTGAGGT ATGAGGAGGC GCTTAGGAGG GTTAAGGCTA AGGGTGGGTT ACCCAGTGAA
CCCACTGAAT CAATATGGGT TGATGAGGAT TACTTAACGT TAATGTACAG TGATGAGGAG
TATGAGGTCT CTAAGGATAA TAGAAGCCTC ATTGAGACTG AGGTAAACTT AGTGAGGATT
GGGGACCTAC TCATGGTCAC TATACCGGGT GAACCATTCA TTGAATCAGC GTTAACCATT
AGTAATGCAG CTGAGGGCAC GGGGTTTAGG GAAACCATGG TTGTTGGTTA CGTTAATGAC
TACGTGGGTT ACATACCCAT TAAGGCATCA TTCATTAAGG GCACTTATGA GGCTAGGTTA
GCCAGGTGGA GTAGGGTTAC CGATGAGGCT GAGGGGTTGA TTACTAGGGC TGTGGAATCT
AACCTAAGGG AAGTGGCATC ATAA
 
Protein sequence
MVIEASYSKV NITPPIGLRL GGYAHRLGKP SNRVHDDLYA RLLLLSSGDV EVIIIQMDLL 
GLYSRDASLI RRSVSKVTGV KEDNVIVAST HTHSAPETII PMWPNTLPYS GEERVKYNDW
FTGVVGKLTE AAGRLNGTER VELSIGAGEV GELCFNRSFK GGLISGESPI LMVKFNKGKV
ALINYPCHPV CNTDLGFSAD YPGVTYEVLL SNGVESMFLT GAAGDIDPIK KGRGFMNYLG
YSLSSSVIKA LNSLKPTAPV ISVKGIKVTL PLRTVNREEA ELRYEEALRR VKAKGGLPSE
PTESIWVDED YLTLMYSDEE YEVSKDNRSL IETEVNLVRI GDLLMVTIPG EPFIESALTI
SNAAEGTGFR ETMVVGYVND YVGYIPIKAS FIKGTYEARL ARWSRVTDEA EGLITRAVES
NLREVAS