Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1038 |
Symbol | |
ID | 5710375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1089227 |
End bp | 1089724 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641275538 |
Product | hypothetical protein |
Protein accession | YP_001540857 |
Protein GI | 159041605 |
COG category | [S] Function unknown |
COG ID | [COG1839] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.000804852 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTATTA AGTTTGATGT GGTGGATGTT AAGTATCCAC CTGACTCAAA CGTAATAATA GGGTACTCGC ACTTCATAAT GACTGTTGAG GATCTTTACG AAGCCCTAGT ATCCTCAGTC CCAGGCATTA AGTTTGGGTT AGCCTTCTGC GAGGCCAGTG GTAAGAGGCT TATTAGGCAT GAGGGTAATG ATGAGGAGCT TAGGGGCGCC GCCATTGACC TATGCTCAAG AATAGCGGCT GGGCACGTAT TCGTAATATT CATTAGGAAC GCCTACCCGA TAAACGTCTT AAACGCTATA AAGAATGTTA AGGAGGTTAC CAGGATACTT GCAGCCACAG GTAACCCCCT CTCCATAATA GTTGCTGAAA TAGCCCCTGA ACGCAGGGGT GTGGTTGGTG TTGTGGATGG TTACTCACCC CTAGGGGTTG AAAAACCTGA GGATGCTAAG GAACGTAAGG AATTGGTTAG GAGGTTCGGT TACAAGATGG CTCCTTAA
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Protein sequence | MSIKFDVVDV KYPPDSNVII GYSHFIMTVE DLYEALVSSV PGIKFGLAFC EASGKRLIRH EGNDEELRGA AIDLCSRIAA GHVFVIFIRN AYPINVLNAI KNVKEVTRIL AATGNPLSII VAEIAPERRG VVGVVDGYSP LGVEKPEDAK ERKELVRRFG YKMAP
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