Gene Cmaq_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1038 
Symbol 
ID5710375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1089227 
End bp1089724 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content46% 
IMG OID641275538 
Producthypothetical protein 
Protein accessionYP_001540857 
Protein GI159041605 
COG category[S] Function unknown 
COG ID[COG1839] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.000804852 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTATTA AGTTTGATGT GGTGGATGTT AAGTATCCAC CTGACTCAAA CGTAATAATA 
GGGTACTCGC ACTTCATAAT GACTGTTGAG GATCTTTACG AAGCCCTAGT ATCCTCAGTC
CCAGGCATTA AGTTTGGGTT AGCCTTCTGC GAGGCCAGTG GTAAGAGGCT TATTAGGCAT
GAGGGTAATG ATGAGGAGCT TAGGGGCGCC GCCATTGACC TATGCTCAAG AATAGCGGCT
GGGCACGTAT TCGTAATATT CATTAGGAAC GCCTACCCGA TAAACGTCTT AAACGCTATA
AAGAATGTTA AGGAGGTTAC CAGGATACTT GCAGCCACAG GTAACCCCCT CTCCATAATA
GTTGCTGAAA TAGCCCCTGA ACGCAGGGGT GTGGTTGGTG TTGTGGATGG TTACTCACCC
CTAGGGGTTG AAAAACCTGA GGATGCTAAG GAACGTAAGG AATTGGTTAG GAGGTTCGGT
TACAAGATGG CTCCTTAA
 
Protein sequence
MSIKFDVVDV KYPPDSNVII GYSHFIMTVE DLYEALVSSV PGIKFGLAFC EASGKRLIRH 
EGNDEELRGA AIDLCSRIAA GHVFVIFIRN AYPINVLNAI KNVKEVTRIL AATGNPLSII
VAEIAPERRG VVGVVDGYSP LGVEKPEDAK ERKELVRRFG YKMAP