| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1031 |
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| Symbol | |
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| ID | 5708990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | + |
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| Start bp | 1084028 |
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| End bp | 1084849 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641275531 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001540851 |
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| Protein GI | 159041599 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0395] ABC-type sugar transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.00426384 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCAGCG CCAGGTACGT ACTTTATCAG CTGGTCCTTG GCGTAATCAT TGCGATTTGG
TTAATACCAC TCTATGCCAT GGTCATTAAC TCCTTCAAAT CCAACATGGA TGCTCTATCA
ACACCGGTGC TTATACCTCG GGGGTTCCAT GTTAGTAATA TAGTCACCGC GGCCCAGGCG
TTGGCGTATG GCTTAGTTAA TAGTGTGATT GTTGTGTTAC CCACTGTGGT AATATCCACA
TTACTGGGCG CCTTATCGGC ATTTGGATTC TATAGGGTTA AGCATTGGCT TAGTGACTTC
CTCTTTACGC TAGTGGCCAT AGGCACCTTC ATACCCTATC AAGTGGCTGC TGTACCGCTT
GTGAAGATAA TGGTGCCCCT GGGACTCTTT AACTCCTACT GGGGGTTGAT ACTGGCATAC
TTAATATTCT TCGTACCCGC AGGGGCCTTG TTAATGTCCA TATTCATCTC AGTAATACCC
AAGGACTATG TGGAGATGGC GTACATAGAC GGTGCTAGTG ACTTAACGGT GTTCCTGAGG
ATAGTACTAC CCCTGACAAT GCCCGGTGTC ATAGCTACTG CAATATACAT ACTAATAATG
TCCTGGAACA ACTTCTTCAT ACCACTGGTC GTCATAAAAT CACCTGAGTT AAGGCCCATA
GCACTCGCCG TTGAGAGATA CATGGGCGGT TACGGGGTAC TGTATAATGA ATTCTACGCT
GCGGCATTAA TAGCGGCTAT AGTGCCGCTG GTGATCTTCA TACTACTGGG TAGGTACTTC
ATAAGGGGGT TGCTGGCCCT GGGCGCTGGC ACAAAGGGTT GA
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| Protein sequence | MPSARYVLYQ LVLGVIIAIW LIPLYAMVIN SFKSNMDALS TPVLIPRGFH VSNIVTAAQA
LAYGLVNSVI VVLPTVVIST LLGALSAFGF YRVKHWLSDF LFTLVAIGTF IPYQVAAVPL
VKIMVPLGLF NSYWGLILAY LIFFVPAGAL LMSIFISVIP KDYVEMAYID GASDLTVFLR
IVLPLTMPGV IATAIYILIM SWNNFFIPLV VIKSPELRPI ALAVERYMGG YGVLYNEFYA
AALIAAIVPL VIFILLGRYF IRGLLALGAG TKG
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