Gene Cmaq_1023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1023 
Symbol 
ID5710132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1073007 
End bp1073582 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content43% 
IMG OID641275524 
Productisochorismatase hydrolase 
Protein accessionYP_001540844 
Protein GI159041592 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.228804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.0648547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTTA ACCTAAGTGA GGATGTGTTA AGGGATATAC TTAAACCAAA CTACTCAATA 
CTAGTTGTCT GGGATGTGCA TAAGGCCCTC TATAACTCAA TATTCAATAA GGATGAGTTC
CTAAACGCCT TAAACAGGGT TATTGAGGCA GCCAGGAGGG TTAAGGTGCC TGTGGTTTTC
ACTAAGATAA CACCATACCC AAGGGGCTTT GAACCACCGG CTTCTAGGCT AGTGCAGTGG
AGGGGTGGAT TTAGACCTGA GGACATGGAG TTAGTTATTC AGCCCCAGGA GAATGAAATA
GTGCTTAATA AGAATACTTG GAGCATATTC GTTGGCACTA ACTTTGAACT CCTACTACGT
AACTCAGGTA GGTCAACAAT AGTATTCACA GGCATTGCAA CAGAGATTGG TGTTGAGACT
AGTGCTAGGC ATGCATATGC CTTAGGCTTC ATACCAGTCA TAATCAGTGA CGCGGTTTCA
TCGTACAATA AGGATGGGCA TGAGAGATCC CTGCAAAACA TGAGGATGTT CTTCCCAGTA
ATAACCTCAA GTGAGTTAGC TAAAATATGG GCTTAA
 
Protein sequence
MALNLSEDVL RDILKPNYSI LVVWDVHKAL YNSIFNKDEF LNALNRVIEA ARRVKVPVVF 
TKITPYPRGF EPPASRLVQW RGGFRPEDME LVIQPQENEI VLNKNTWSIF VGTNFELLLR
NSGRSTIVFT GIATEIGVET SARHAYALGF IPVIISDAVS SYNKDGHERS LQNMRMFFPV
ITSSELAKIW A