Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1023 |
Symbol | |
ID | 5710132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | + |
Start bp | 1073007 |
End bp | 1073582 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641275524 |
Product | isochorismatase hydrolase |
Protein accession | YP_001540844 |
Protein GI | 159041592 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.228804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0648547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGCTTA ACCTAAGTGA GGATGTGTTA AGGGATATAC TTAAACCAAA CTACTCAATA CTAGTTGTCT GGGATGTGCA TAAGGCCCTC TATAACTCAA TATTCAATAA GGATGAGTTC CTAAACGCCT TAAACAGGGT TATTGAGGCA GCCAGGAGGG TTAAGGTGCC TGTGGTTTTC ACTAAGATAA CACCATACCC AAGGGGCTTT GAACCACCGG CTTCTAGGCT AGTGCAGTGG AGGGGTGGAT TTAGACCTGA GGACATGGAG TTAGTTATTC AGCCCCAGGA GAATGAAATA GTGCTTAATA AGAATACTTG GAGCATATTC GTTGGCACTA ACTTTGAACT CCTACTACGT AACTCAGGTA GGTCAACAAT AGTATTCACA GGCATTGCAA CAGAGATTGG TGTTGAGACT AGTGCTAGGC ATGCATATGC CTTAGGCTTC ATACCAGTCA TAATCAGTGA CGCGGTTTCA TCGTACAATA AGGATGGGCA TGAGAGATCC CTGCAAAACA TGAGGATGTT CTTCCCAGTA ATAACCTCAA GTGAGTTAGC TAAAATATGG GCTTAA
|
Protein sequence | MALNLSEDVL RDILKPNYSI LVVWDVHKAL YNSIFNKDEF LNALNRVIEA ARRVKVPVVF TKITPYPRGF EPPASRLVQW RGGFRPEDME LVIQPQENEI VLNKNTWSIF VGTNFELLLR NSGRSTIVFT GIATEIGVET SARHAYALGF IPVIISDAVS SYNKDGHERS LQNMRMFFPV ITSSELAKIW A
|
| |