Gene Cmaq_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1007 
Symbol 
ID5710055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1058695 
End bp1059207 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content42% 
IMG OID641275508 
Producthypothetical protein 
Protein accessionYP_001540828 
Protein GI159041576 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.727004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.795724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGG AGGTTAAGCC CATTTACGCT AAGGGTTTCT TCACAATGGA TCTCAACGGC 
ACTGTTAGGC AGTACACTGT TTTCTACTAC ACCGACCCTA AGCACTACTA CGCTAATTTA
ACTAAGGAGG GGTATAGGAG GGAGTTAAGC CTACTGAGGC GTAATATGCA GCGTTTCCTT
GATGAGGAGG TTATTAGGAT GAATGGTGTT AGGGTTAAGG CTAAGGTAAT TCACGTTAAC
ATTGGGCTAT TAACAGTTAA CCTACCCTTC ATTGAATTCC TAATAACGTT TAAAGGATCC
CTAAGGAGTG GTGTCAACAC TTATGAGGAT GAGTATGAGG AGGAGGTCAC TGAGTATCCC
TATGACATAG TGTGGTGGCT TCCTGGTAAT GTTACTGAAG TATCCATGGC TGGTGAAGTT
AACGTTAAGG ATAATATCAT TACCGTGAGG GTTAATGAGG GTGTTAAAGT TGGCGGCAGG
GAGACGATAA GCTTCATCAT TGATAATACT TAA
 
Protein sequence
MSEEVKPIYA KGFFTMDLNG TVRQYTVFYY TDPKHYYANL TKEGYRRELS LLRRNMQRFL 
DEEVIRMNGV RVKAKVIHVN IGLLTVNLPF IEFLITFKGS LRSGVNTYED EYEEEVTEYP
YDIVWWLPGN VTEVSMAGEV NVKDNIITVR VNEGVKVGGR ETISFIIDNT