Gene Cmaq_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1005 
Symbol 
ID5710053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1058015 
End bp1058359 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content41% 
IMG OID641275506 
Productcupin 2 domain-containing protein 
Protein accessionYP_001540826 
Protein GI159041574 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTT ACAGGTTAAG TAATATTAAG GGGGAAGAGG TTAACGCATT AACAACCAGG 
AGGTACATTA ATGGTGAAAG AATGACCCTT GCACAATTCA TGTTTAAGAA AGGCGCCAAG
GTTAAGAGGC ATGCACACAT TAATGAGCAA TTCTCAATAA TATTAACAGG CAGGTTAAGG
TTTAGGATAA ATAATGAGGA GTACATTGCT GAAGCCGGAG ACGTGGTTCA CGTACCCTCA
AATATGGAGC ATGAGGTTGA GGCACTGGAG GATTCAATAG TAGTGGATGT ATACAGTCCA
ATTAGGGAGG ATTGGCTTAA GGGGGAGGAT AAATACTTAA GGTGA
 
Protein sequence
MPLYRLSNIK GEEVNALTTR RYINGERMTL AQFMFKKGAK VKRHAHINEQ FSIILTGRLR 
FRINNEEYIA EAGDVVHVPS NMEHEVEALE DSIVVDVYSP IREDWLKGED KYLR