Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cmaq_1005 |
Symbol | |
ID | 5710053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caldivirga maquilingensis IC-167 |
Kingdom | Archaea |
Replicon accession | NC_009954 |
Strand | - |
Start bp | 1058015 |
End bp | 1058359 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641275506 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001540826 |
Protein GI | 159041574 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTT ACAGGTTAAG TAATATTAAG GGGGAAGAGG TTAACGCATT AACAACCAGG AGGTACATTA ATGGTGAAAG AATGACCCTT GCACAATTCA TGTTTAAGAA AGGCGCCAAG GTTAAGAGGC ATGCACACAT TAATGAGCAA TTCTCAATAA TATTAACAGG CAGGTTAAGG TTTAGGATAA ATAATGAGGA GTACATTGCT GAAGCCGGAG ACGTGGTTCA CGTACCCTCA AATATGGAGC ATGAGGTTGA GGCACTGGAG GATTCAATAG TAGTGGATGT ATACAGTCCA ATTAGGGAGG ATTGGCTTAA GGGGGAGGAT AAATACTTAA GGTGA
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Protein sequence | MPLYRLSNIK GEEVNALTTR RYINGERMTL AQFMFKKGAK VKRHAHINEQ FSIILTGRLR FRINNEEYIA EAGDVVHVPS NMEHEVEALE DSIVVDVYSP IREDWLKGED KYLR
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