| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cmaq_1003 |
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| Symbol | |
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| ID | 5710455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caldivirga maquilingensis IC-167 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009954 |
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| Strand | - |
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| Start bp | 1056091 |
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| End bp | 1057359 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641275504 |
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| Product | RNA modification protein |
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| Protein accession | YP_001540824 |
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| Protein GI | 159041572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01578] MiaB-like tRNA modifying enzyme, archaeal-type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCCACGT ACTACATTGA GACTTATGGT TGCTGGCTGA ATAAGGCTGA TTCAGCATTA
ATGGAGGAGG ATTTAAGGAG AATGGGTTAC GTTAAGGTTA ATGATCCTGC TCAAGCAGAC
TTAATACTAG TTAATACATG TGCTGTTAGG GAGGATTCAG AGATTAGGGA ACTTAAGGCT
ATTGAGAAGT ACTCTAGGTT AGGTAAGAAG CTAATAGTGG CCGGGTGCTT AACTAAGGCA
AGGCCCAGTG AAATAATGAG ACTAGCCCCT GACGCATTAA TAGTGAATCC AAGTTCCGTT
GAAAATTTGG CCGAGTTGTT AAAGGGTGGT GTTAATTTAA CTGAGAGGTT AATGGTTAGG
ATTCCTAAGT ACTATGAATC AAGCCACGTT TACGTTGTGC CTATTCAAGT TGGTTGCCTT
GGTAACTGCT CATACTGCGT TATCAAATAC ACTAGGGGTG GTATGGGTTG GGTTAAGAGC
GCTGATTTAA GCGTGGTTAA GGAATCCATA GCCAAGGCAG TGGCAAGGGG TGCTAGGGAG
ATTTACTTAA CTGGACAGGA GATTTCAGCG TACGGTAAGG ATAAGGGTTA TGACTTAGTT
GACTTACTTG AGGCAGTATT GAGGGATGTT GAGGGAAGGT ACTTGATTAG GTTAGGTATG
CTTGAGCCAC TGGAGCTTGA GGGGATGATA CATAGGTTAA TTGATGTAAT TAAGAATGAC
TGGAGAATCT ACAGGTTCTT CCACATACCT GTGCAAAGCG GTAGTGATAA GGTGCTTAGA
TTAATGAAGC GTAAGTACAC TGTGGATTTG TTTAAACGGG AAGTGGAGTT AATTAGGAGG
AGCTTCCGTA ACTCATTCAT AGCCACAGAC ATCATAGTTG GCCACCCTGG GGAGGATGAT
TCTGATTTCC AGGAGAGCGT TAGGTTGATT AGGGAACTAG GTATTGATAA GGTTCATGTC
GCCAGATATA GCCCAAGACC ATTCACTGAG GCTGCTTACA TGCGTCAAGT ACCTGATCAG
GTTAAGAAGC AGAGGAGCAG CATGTTAAGT AAGGTGGCCC TTGAGGTGGC GTATTCCAGG
AACCTTGAGT ACGTTGGCGG CACCTACGAG GGGTTAATTA GCTCAATTGG GTTTAAGGGT
AGGGGACTTA TGGCTAGGTT AATGGACTAT AGGCCAGTTA TCATTAATGA GGGTGACTTA
GGCTCATTCG TGAAAATTAA GGTAACTGGG GCCTCATCAA TAAACTTAAT CGGCAAAATA
ATTGAATGA
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| Protein sequence | MPTYYIETYG CWLNKADSAL MEEDLRRMGY VKVNDPAQAD LILVNTCAVR EDSEIRELKA
IEKYSRLGKK LIVAGCLTKA RPSEIMRLAP DALIVNPSSV ENLAELLKGG VNLTERLMVR
IPKYYESSHV YVVPIQVGCL GNCSYCVIKY TRGGMGWVKS ADLSVVKESI AKAVARGARE
IYLTGQEISA YGKDKGYDLV DLLEAVLRDV EGRYLIRLGM LEPLELEGMI HRLIDVIKND
WRIYRFFHIP VQSGSDKVLR LMKRKYTVDL FKREVELIRR SFRNSFIATD IIVGHPGEDD
SDFQESVRLI RELGIDKVHV ARYSPRPFTE AAYMRQVPDQ VKKQRSSMLS KVALEVAYSR
NLEYVGGTYE GLISSIGFKG RGLMARLMDY RPVIINEGDL GSFVKIKVTG ASSINLIGKI
IE
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