Gene Cmaq_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCmaq_1001 
Symbol 
ID5710453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaldivirga maquilingensis IC-167 
KingdomArchaea 
Replicon accessionNC_009954 
Strand
Start bp1053857 
End bp1054624 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content44% 
IMG OID641275502 
Productaspartate/glutamate/uridylate kinase 
Protein accessionYP_001540822 
Protein GI159041570 
COG category[R] General function prediction only 
COG ID[COG1608] Predicted archaeal kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.56233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.37814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA TTAAGCTGGG TGGATCAGCA TTCAGTAATA AGGCTAAGCC ATTATCATTC 
CATGAGGAAC CGGTGCGAAA CCTAGCATTA TTAATTAAGC AACACGGCAT TACACCTGTA
TTAATACATG GAGGTGGATC CTTCGCCCAC CCTGTGGCTA AGGCTTATGG GTTGGATAAG
GGGATTAGGG ATGATGCGCA ATTAATCGGT GTATCATTAA CGTCATTAAC ATTAAGCCTA
CTTAATGAGA GGATAACATC AATATTCTCC AAGCTGGGGT TACCCACCTA CACGATAAGA
ACTGGGGCGG TGTTCATGAG GACATTAAGT GGACTTAAGT TAAGTGGTGA CGTAGTAGAC
TTAGTGAGGA GACTAGTGGG AATGAGGATT ATCCCAGTCT TCTACGGTGA CGTGATTCAT
GATTATGAAT TAGGCTTCAG TATACTGAGT GGTGATGAGA TAATGGTTGA GTTAGCTAAG
CGGCTTAAGC CAAGGTACGC ATTATTCCTA ATGGATGTTG AGGGAGTTTA CAGCGAGGGA
CCTAGGAGGG GTGAGTTAAT TAGGGTGTTT AAGCCAAGCA CCAGCATATC ATACAGTAGT
AGTGGAGTTG ATGCCACTGG GGGGTTAATG GGTAAGCTTA AGCATGCCAT TGAATTAGCT
GAGATGAGTG TTCAAACATA CTTATGCTCA GTAATGGACC AGGAATCCAT AAGCCTAATC
CTCACCGGTG GGGAACCCAG GGGATGCACT AGAATTGAGG CTACGTAA
 
Protein sequence
MILIKLGGSA FSNKAKPLSF HEEPVRNLAL LIKQHGITPV LIHGGGSFAH PVAKAYGLDK 
GIRDDAQLIG VSLTSLTLSL LNERITSIFS KLGLPTYTIR TGAVFMRTLS GLKLSGDVVD
LVRRLVGMRI IPVFYGDVIH DYELGFSILS GDEIMVELAK RLKPRYALFL MDVEGVYSEG
PRRGELIRVF KPSTSISYSS SGVDATGGLM GKLKHAIELA EMSVQTYLCS VMDQESISLI
LTGGEPRGCT RIEAT